ncRNA ID | novel_gma_miR7712 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr1:11230090-11230312 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451612 |
Length | 22 |
Mature sequence(if miRNA) | 202 - UUUGUGUUUUCCUUCAUGUGAC - 223 |
Stem-loop(if miRNA) |
--          C        GA  C              C   A            AUAUAUUAU    -     UUACAA  CAAAGAUUUUGACGAUGAUUUCUUUCCUUUAAGUG   UUUGUGUUUU CUUCAUGU  CA UACGUUUCAAGAUA GUU AUCACUAACUUC         ACAC CUUAA      AG                                   U   |||||||||| ||||||||  || |||||||||||||| ||| ||||||||||||         |||| |||||      ||                                   G   AAACACGAAA GAAGUACG  GU AUGCAGAGUUCUAU CAA UAGUGAUUGAAG         UAGA UGUGA      UU                                   U UA          A        UC  U              A   G            ---------    C     ------  UAGUAAUUGCAUCUGAACCUAAUUUUUUACUUACU |
Stem-loop sequence | UUUGUGUUUUCCUUCAUGUGACACUACGUUUCAAGAUACGUUAAUCACUAACUUCAUAUAUUAUACACCUUAAUUACAAAGCAAAGAUUUUGACGAUGAUUUCUUUCCUUUAAGUGUGUUCAUUCAUUUUUUAAUCCAAGUCUACGUUAAUGAUUUAGUGUCAGAUGAAGUUAGUGAUGAACAUAUCUUGAGACGUAUUGCUGCAUGAAGAAAAGCACAAAAU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003520049.3 |
|
2.0 | PREDICTED: Glycine max probable WRKY transcription factor 4 (LOC100799335), mRNA | probable WRKY transcription factor 4(LOC100799335) | coding protein | psRNATarget | |||||||||
EU019557.1 |
|
2.0 | Glycine max transcription factor (WRKY9) mRNA, partial cds | NA | coding protein | psRNATarget | |||||||||
XM_003517766.3 |
|
2.0 | PREDICTED: Glycine max probable WRKY transcription factor 4 (LOC100127369), mRNA | probable WRKY transcription factor 4(LOC100127369) | coding protein | psRNATarget |