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BaseInfo

ncRNA ID novel_gma_miR7698
Species Glycine max
Class miRNA
Genome position Chr1:27255962-27256052 [-]
Reference genome Glycine_max_v2.0
Source SRR1451612
Length 22
Mature sequence(if miRNA) 1 - UUUGCACGUCUACGAUAACUCC - 22
Stem-loop(if miRNA) --       U   A  C  U   ----     AUUUCA    CU    G
  GGUUGUU GUA AU UG CAA    UGUUG      UGAA  AUGU U
  ||||||| ||| || || |||    |||||      ||||  ||||
  UCAAUAG CAU UG AC GUU    ACAAC      ACUU  UACA U
CC       -   C  C  -   UUAC     -GUUUC    AU    G
Stem-loop sequence GGUUGUUUGUAAAUCUGUCAAUGUUGAUUUCAUGAACUAUGUGUUGACAUUAUUCACUUUGCAACACAUUUUGCACGUCUACGAUAACUCC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006604754.2
ncRNA:22   CCUCAAUAGCAUCUGCACGUUU   1
  |*|**|=|||||||||||||||
targets:525   GAACCUGUCGUAGACGUGCAAA   546

3.0 PREDICTED: Glycine max acyl-CoA-binding domain-containing protein 4-like (LOC100777579), transcript variant X1, mRNA acyl-CoA-binding domain-containing protein 4-like(LOC100777579) coding protein psRNATarget
XM_014771945.1
ncRNA:22   CCUCAAUAGCAUCUGCACGUUU   1
  |*|**|=|||||||||||||||
targets:526   GAACCUGUCGUAGACGUGCAAA   547

3.0 PREDICTED: Glycine max acyl-CoA-binding domain-containing protein 4-like (LOC100777579), transcript variant X2, mRNA acyl-CoA-binding domain-containing protein 4-like(LOC100777579) coding protein psRNATarget