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BaseInfo

ncRNA ID novel_gma_miR7695
Species Glycine max
Class miRNA
Genome position Chr15:28730619-28730706 [+]
Reference genome Glycine_max_v2.0
Source SRR1451612
Length 22
Mature sequence(if miRNA) 1 - UUAGAUGAUCAAUGUCUACGGU - 22
Stem-loop(if miRNA) ----UU   U    AA     A      AACUCUCAAUUUUCU      A
      AGA GAUC  UGUCU CGGUAC               UCUAGG U
      ||| ||||  ||||| ||||||               |||||| C
      UCU UUAG  ACAGA GCCAUG               AGAUUC A
GCAAUU   -    AC     -      ---------AAUCCC      U
Stem-loop sequence UUAGAUGAUCAAUGUCUACGGUACAACUCUCAAUUUUCUUCUAGGAUCAUCUUAGACCCUAAGUACCGAGACACAGAUUUCUUUAACG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK245212.1
ncRNA:22   UGGCAUCUGUAACUAGUAGAUU   1
  =|=*|||||||||||*||||||
targets:255   GCUAUAGACAUUGAUGAUCUAA   276

2.5 Glycine max cDNA, clone: GMFL01-23-O13 NA coding protein psRNATarget
XM_003535979.3
ncRNA:22   UGGCAUCUGUAACUAGUAGAUU   1
  =|=*|||||||||||*||||||
targets:382   GCUAUAGACAUUGAUGAUCUAA   403

2.5 PREDICTED: Glycine max uncharacterized LOC100776861 (LOC100776861), mRNA uncharacterized LOC100776861(LOC100776861) coding protein psRNATarget
XM_003541806.3
ncRNA:22   UGGCAUCUGUAACUAGUAGAUU   1
  ***||||||||*|||||||||*
targets:166   UAGGUAGACAUGGAUCAUCUAC   187

2.5 PREDICTED: Glycine max ABC transporter G family member 9 (LOC100816135), mRNA ABC transporter G family member 9(LOC100816135) coding protein psRNATarget