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BaseInfo

ncRNA ID novel_gma_miR7685
Species Glycine max
Class miRNA
Genome position Chr1:39453576-39453649 [-]
Reference genome Glycine_max_v2.0
Source SRR1451612
Length 24
Mature sequence(if miRNA) 1 - UAUGGGUCAUACGGAUUGCUGAUC - 24
Stem-loop(if miRNA) --              A G            -   AU
  UUAGCAAUCUGUAU G UCAUGCGGAUUG UCA  C
  |||||||||||||| | |||||||||||| |||  U
  AGUCGUUAGGCAUA U GGUAUGCCUAAC AGU  G
CU              C G            G   AU
Stem-loop sequence UUAGCAAUCUGUAUAGGUCAUGCGGAUUGUCAAUCUGUAUGAGCAAUCCGUAUGGGUCAUACGGAUUGCUGAUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014768530.1
ncRNA:24   CUAGUCGUUAGGCAUACUGGGUAU   1
  |=|--|==|||||||||||||||*
targets:514   GGU--GUGAUCCGUAUGACCCAUU   535

3.0 PREDICTED: Glycine max acid phosphatase 1-like (LOC100790842), transcript variant X2, mRNA acid phosphatase 1-like(LOC100790842) coding protein psRNATarget
XM_014768531.1
ncRNA:24   CUAGUCGUUAGGCAUACUGGGUAU   1
  |=|--|==|||||||||||||||*
targets:542   GGU--GUGAUCCGUAUGACCCAUU   563

3.0 PREDICTED: Glycine max acid phosphatase 1-like (LOC100790842), transcript variant X3, mRNA acid phosphatase 1-like(LOC100790842) coding protein psRNATarget
XM_003548285.3
ncRNA:24   CUAGUCGUUAGGCAUACUGGGUAU   1
  |=|--|==|||||||||||||||*
targets:581   GGU--GUGAUCCGUAUGACCCAUU   602

3.0 PREDICTED: Glycine max acid phosphatase 1-like (LOC100790842), transcript variant X1, mRNA acid phosphatase 1-like(LOC100790842) coding protein psRNATarget
XM_003521948.3
ncRNA:24   CUAGUCGUUAGGCAUACUGGGUAU   1
  |=|--|==|||||||||||||||*
targets:614   GGU--GUGAUCCGUAUGACCCAUU   635

3.0 PREDICTED: Glycine max acid phosphatase 1-like (LOC100777758), transcript variant X2, mRNA acid phosphatase 1-like(LOC100777758) coding protein psRNATarget
XM_006576215.2
ncRNA:24   CUAGUCGUUAGGCAUACUGGGUAU   1
  |=|--|==|||||||||||||||*
targets:643   GGU--GUGAUCCGUAUGACCCAUU   664

3.0 PREDICTED: Glycine max acid phosphatase 1-like (LOC100777758), transcript variant X3, mRNA acid phosphatase 1-like(LOC100777758) coding protein psRNATarget
XM_006576216.2
ncRNA:24   CUAGUCGUUAGGCAUACUGGGUAU   1
  |=|--|==|||||||||||||||*
targets:665   GGU--GUGAUCCGUAUGACCCAUU   686

3.0 PREDICTED: Glycine max acid phosphatase 1-like (LOC100777758), transcript variant X1, mRNA acid phosphatase 1-like(LOC100777758) coding protein psRNATarget