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BaseInfo

ncRNA ID novel_gma_miR7682
Species Glycine max
Class miRNA
Genome position Chr1:40044587-40044687 [-]
Reference genome Glycine_max_v2.0
Source SRR1451612
Length 21
Mature sequence(if miRNA) 1 - UCUAAGUAAACUCAGUAGACU - 21
Stem-loop(if miRNA) --     -     C     UCC     -     GA   UU    AA   CCU
  UUUAC GAGUU ACUUG   UUUGU GAGUU  CUC  GAGU  ACU   U
  ||||| ||||| |||||   ||||| |||||  |||  ||||  |||
  AGAUG CUCAA UGAAU   AAAUA CUCAA  GGG  UUCA  UGA   U
UC     A     A     CUC     U     AC   -U    GA   UUU
Stem-loop sequence UUUACGAGUUCACUUGUCCUUUGUGAGUUGACUCUUGAGUAAACUCCUUUUUUAGUAGACUUUGGGCAAACUCUAUAAACUCUAAGUAAACUCAGUAGACU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014768054.1
ncRNA:21   UCAGAUGACUCAAAUGAAUCU   1
  |||||||*|||||||||||||
targets:242   AGUCUACCGAGUUUACUUAGA   262

1.0 PREDICTED: Glycine max cyclin-T1-3-like (LOC100791516), transcript variant X2, mRNA cyclin-T1-3-like(LOC100791516) coding protein psRNATarget