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BaseInfo

ncRNA ID novel_gma_miR7679
Species Glycine max
Class miRNA
Genome position Chr1:41441792-41441901 [-]
Reference genome Glycine_max_v2.0
Source SRR1451612
Length 22
Mature sequence(if miRNA) 89 - UAAUAACCGUCUUUGAAUGCCU - 110
Stem-loop(if miRNA) --               A    CUAU  U  CACACA       GAC       A
  UAAUAACCGUCUUUG AUGC    UC GA      GUUCAAA   GGUUAUU A
  ||||||||||||||| ||||    || ||      |||||||   |||||||
  AUUAUUGGCAGAAAC UACG    AG CU      UAAGUUU   CCAAUAA C
CG               A    ACAC  U  CAAAUG       AUA       A
Stem-loop sequence UAAUAACCGUCUUUGAAUGCCUAUUCUGACACACAGUUCAAAGACGGUUAUUAACAAAUAACCAUAUUUGAAUGUAAACUCUGACACAGCAUACAAAGACGGUUAUUAGC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014775607.1
ncRNA:22   UCCGUAAGUUUCUGCCAAUAAU   1
  ***|||||||||||||||||||
targets:1486   UAACAUUCAAAGACGGUUAUUA   1507

0.0 PREDICTED: Glycine max protein MOR1 (LOC102659664), transcript variant X1, mRNA protein MOR1(LOC102659664) coding protein psRNATarget
XM_014775607.1
ncRNA:22   UCCGUAAGUUUCUGCCAAUAAU   1
  ***|||||||||||||||||||
targets:1541   CAACAUUCAAAGACGGUUAUUA   1562

0.0 PREDICTED: Glycine max protein MOR1 (LOC102659664), transcript variant X1, mRNA protein MOR1(LOC102659664) coding protein psRNATarget
XM_014775607.1
ncRNA:22   UCCGUAAGUUUCUGCCAAUAAU   1
  **||||||||||=|||||||||
targets:1651   UAGCAUUCAAAGGCGGUUAUUA   1672

1.5 PREDICTED: Glycine max protein MOR1 (LOC102659664), transcript variant X1, mRNA protein MOR1(LOC102659664) coding protein psRNATarget
XM_014775607.1
ncRNA:22   UCCGUAAGUUUCUGCCAAUAAU   1
  ***|||||||||=|||||||||
targets:1596   UAACAUUCAAAGGCGGUUAUUA   1617

1.5 PREDICTED: Glycine max protein MOR1 (LOC102659664), transcript variant X1, mRNA protein MOR1(LOC102659664) coding protein psRNATarget
XM_014773514.1
ncRNA:22   UCCGUAAGUUUCUGCCAAUAAU   1
  |**|||||*||||||||||||*
targets:266   ACACAUUCUAAGACGGUUAUUU   287

2.0 PREDICTED: Glycine max uncharacterized LOC106798042 (LOC106798042), transcript variant X1, mRNA uncharacterized LOC106798042(LOC106798042) coding protein psRNATarget
XM_006599236.2
ncRNA:22   UCCGUAAGUUUCUGCCAAUAAU   1
  |**||||=*||||||||||||=
targets:477   ACACAUUUUAAGACGGUUAUUG   498

3.0 PREDICTED: Glycine max uncharacterized LOC100788736 (LOC100788736), transcript variant X1, mRNA uncharacterized LOC100788736(LOC100788736) coding protein psRNATarget