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BaseInfo

ncRNA ID novel_gma_miR7667
Species Glycine max
Class miRNA
Genome position Chr1:6034662-6034797 [+]
Reference genome Glycine_max_v2.0
Source SRR1451612
Length 24
Mature sequence(if miRNA) 113 - UUCCAAGAACCGUCUUAGUAUGUC - 136
Stem-loop(if miRNA) --            A                 U           -----U   -----       CA   UUU
  CAUACUAAGAUG UUUUUGGAAUAACCGUC UAGUAUGUCUU      CUU     UCUAAGA  GUU   U
  |||||||||||| ||||||||||||||||| |||||||||||      |||     |||||||  |||
  GUAUGAUUCUGC AAGAACCUUAUUGGCAG AUUAUACAGAG      GAA     AGAUUCU  UAA   C
CU            C                 C           UACACU   UUCUU       AC   UAA
Stem-loop sequence CAUACUAAGAUGAUUUUUGGAAUAACCGUCUUAGUAUGUCUUUCUUUCUAAGACAGUUUUUUCAAUAAUCAUCUUAGAUUCUUAAGUCACAUGAGACAUAUUACGACGGUUAUUCCAAGAACCGUCUUAGUAUGUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014771087.1
ncRNA:24   CUGUAUGAUUCUGCCAAGAACCUU   1
  *||||*||||||||||||||*|||
targets:2512   CACAUUCUAAGACGGUUCUUUGAA   2535

2.5 PREDICTED: Glycine max uncharacterized LOC102664939 (LOC102664939), transcript variant X2, mRNA uncharacterized LOC102664939(LOC102664939) coding protein psRNATarget