ncRNA ID | novel_gma_miR7667 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr1:6034662-6034797 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451612 |
Length | 24 |
Mature sequence(if miRNA) | 113 - UUCCAAGAACCGUCUUAGUAUGUC - 136 |
Stem-loop(if miRNA) |
--            A                 U           -----U   -----       CA   UUU   CAUACUAAGAUG UUUUUGGAAUAACCGUC UAGUAUGUCUU      CUU     UCUAAGA  GUU   U   |||||||||||| ||||||||||||||||| |||||||||||      |||     |||||||  |||   GUAUGAUUCUGC AAGAACCUUAUUGGCAG AUUAUACAGAG      GAA     AGAUUCU  UAA   C CU            C                 C           UACACU   UUCUU       AC   UAA |
Stem-loop sequence | CAUACUAAGAUGAUUUUUGGAAUAACCGUCUUAGUAUGUCUUUCUUUCUAAGACAGUUUUUUCAAUAAUCAUCUUAGAUUCUUAAGUCACAUGAGACAUAUUACGACGGUUAUUCCAAGAACCGUCUUAGUAUGUC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_014771087.1 |
|
2.5 | PREDICTED: Glycine max uncharacterized LOC102664939 (LOC102664939), transcript variant X2, mRNA | uncharacterized LOC102664939(LOC102664939) | coding protein | psRNATarget |