ncRNA ID | novel_gma_miR7666 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr1:48011401-48011525 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451612 |
Length | 21 |
Mature sequence(if miRNA) | 105 - CUUCCGGUAGAAUAAAUUGUU - 125 |
Stem-loop(if miRNA) |
--       UA             UA   A           A CGA    GC  C      A   CUUCCGG  GAAUAAAUUGUUC  CCA AAGAACCUUUU C   AGAA  UA CGGAAG A   |||||||  |||||||||||||  ||| ||||||||||| |   ||||  || |||||| G   GAAGGCC  CUUGUUUAACAAG  GGU UUCUUGGAAGA G   UCUU  AU GCCUUC U AA       UA             UA   C           A AUC    AA  A      U |
Stem-loop sequence | CUUCCGGUAGAAUAAAUUGUUCUACCAAAAGAACCUUUUACCGAAGAAGCUACCGGAAGAAGUUCUUCCGAUAAAUUCUCUAGAAGAAGGUUCUUCUGGAUGAACAAUUUGUUCAUCCGGAAGAA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AB498937.1 |
|
2.5 | Glycine max GmCRY2b mRNA for cryptochrome2, complete cds | NA | coding protein | psRNATarget | |||||||||
NM_001254622.1 |
|
2.5 | Glycine max cryptochrome-2-like (GMCRY2B), mRNA | cryptochrome-2-like(GMCRY2B) | coding protein | psRNATarget |