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BaseInfo

ncRNA ID novel_gma_miR7660
Species Glycine max
Class miRNA
Genome position Chr1:52821877-52821930 [-]
Reference genome Glycine_max_v2.0
Source SRR1451612
Length 24
Mature sequence(if miRNA) 31 - AACAUAAAAAUUGCUGAUCUGUAU - 54
Stem-loop(if miRNA) --      AAA    C         UG
  AACAUA   AUUG UGAUCUGUA  A
  ||||||   |||| |||||||||
  UUGUAU   UAAU AUUAGACAU  U
CU      GCC    U         UU
Stem-loop sequence AACAUAAAAAUUGCUGAUCUGUAUGAUUUUACAGAUUAUUAAUCCGUAUGUUUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014773215.1
ncRNA:24   UAUGUCUAGUCGUUAAAAAUACAA   1
  *||-|*||=|||||||||||||||
targets:366   UUA-AUAUUAGCAAUUUUUAUGUU   388

2.0 PREDICTED: Glycine max lysine-specific demethylase JMJ25-like (LOC106797914), transcript variant X2, mRNA lysine-specific demethylase JMJ25-like(LOC106797914) coding protein psRNATarget
XM_014773214.1
ncRNA:24   UAUGUCUAGUCGUUAAAAAUACAA   1
  *||-|*||=|||||||||||||||
targets:366   UUA-AUAUUAGCAAUUUUUAUGUU   388

2.0 PREDICTED: Glycine max lysine-specific demethylase JMJ25-like (LOC106797914), transcript variant X1, mRNA lysine-specific demethylase JMJ25-like(LOC106797914) coding protein psRNATarget
XM_014765422.1
ncRNA:24   UAUGUCUAGUCGUUAAAAAUACAA   1
  *||-|*||=|||||||||||||||
targets:753   UUA-AUAUUAGCAAUUUUUAUGUU   775

2.0 PREDICTED: Glycine max 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase-like (LOC100777277), transcript variant X8, mRNA 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase-like(LOC100777277) coding protein psRNATarget
XM_014765420.1
ncRNA:24   UAUGUCUAGUCGUUAAAAAUACAA   1
  *||-|*||=|||||||||||||||
targets:752   UUA-AUAUUAGCAAUUUUUAUGUU   774

2.0 PREDICTED: Glycine max 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase-like (LOC100777277), transcript variant X6, mRNA 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase-like(LOC100777277) coding protein psRNATarget
XM_014765418.1
ncRNA:24   UAUGUCUAGUCGUUAAAAAUACAA   1
  *||-|*||=|||||||||||||||
targets:751   UUA-AUAUUAGCAAUUUUUAUGUU   773

2.0 PREDICTED: Glycine max 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase-like (LOC100777277), transcript variant X4, mRNA 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase-like(LOC100777277) coding protein psRNATarget
XM_014765421.1
ncRNA:24   UAUGUCUAGUCGUUAAAAAUACAA   1
  *||-|*||=|||||||||||||||
targets:752   UUA-AUAUUAGCAAUUUUUAUGUU   774

2.0 PREDICTED: Glycine max 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase-like (LOC100777277), transcript variant X7, mRNA 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase-like(LOC100777277) coding protein psRNATarget
XM_014765417.1
ncRNA:24   UAUGUCUAGUCGUUAAAAAUACAA   1
  *||-|*||=|||||||||||||||
targets:751   UUA-AUAUUAGCAAUUUUUAUGUU   773

2.0 PREDICTED: Glycine max 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase-like (LOC100777277), transcript variant X3, mRNA 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase-like(LOC100777277) coding protein psRNATarget
XM_014765425.1
ncRNA:24   UAUGUCUAGUCGUUAAAAAUACAA   1
  *||-|*||=|||||||||||||||
targets:753   UUA-AUAUUAGCAAUUUUUAUGUU   775

2.0 PREDICTED: Glycine max 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase-like (LOC100777277), transcript variant X11, mRNA 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase-like(LOC100777277) coding protein psRNATarget
XM_014765424.1
ncRNA:24   UAUGUCUAGUCGUUAAAAAUACAA   1
  *||-|*||=|||||||||||||||
targets:753   UUA-AUAUUAGCAAUUUUUAUGUU   775

2.0 PREDICTED: Glycine max 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase-like (LOC100777277), transcript variant X10, mRNA 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase-like(LOC100777277) coding protein psRNATarget
XM_014765423.1
ncRNA:24   UAUGUCUAGUCGUUAAAAAUACAA   1
  *||-|*||=|||||||||||||||
targets:753   UUA-AUAUUAGCAAUUUUUAUGUU   775

2.0 PREDICTED: Glycine max 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase-like (LOC100777277), transcript variant X9, mRNA 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase-like(LOC100777277) coding protein psRNATarget
XM_003541387.3
ncRNA:24   UAUGUCUAGUCGUUAAAAAUACAA   1
  ||=|=*||||||||||||||*|||
targets:360   AUGCGUAUCAGCAAUUUUUAAGUU   383

2.5 PREDICTED: Glycine max vacuolar protein-sorting-associated protein 37 homolog 1-like (LOC100818793), mRNA vacuolar protein-sorting-associated protein 37 homolog 1-like(LOC100818793) coding protein psRNATarget
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