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BaseInfo

ncRNA ID ahy-miR3519
Species Arachis hypogaea
Class miRNA
Genome position NA
Reference genome NA
Source miRBase
Length 21
Mature sequence(if miRNA) NA - UCAAUCAAUGACAGCAUUUCA - NA
Stem-loop(if miRNA) ---GA    UG   A    GCU     -       AGUUCUAAACUUUUU     AAU
     UGAA  GCU UCAU   UUGAG UGUUGUG               CUGUG   A
     ||||  ||| ||||   ||||| |||||||               |||||
     ACUU  CGA AGUA   AACUU ACGAUAC               GACAC   U
UGUUA    UA   C    ACU     G       ----------GUUUU     AUA
Stem-loop sequence GAUGAAUGGCUAUCAUGCUUUGAGUGUUGUGAGUUCUAAACUUUUUCUGUGAAUAUAUACACAGUUUUGCAUAGCAGUUCAAUCAAUGACAGCAUUUCAAUUGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EZ736979.1
ncRNA:21   ACUUUACGACAGUAACUAACU   1
  |||||||||||||||||||||
targets:492   UGAAAUGCUGUCAUUGAUUGA   512

0.0 TSA: Arachis hypogaea CL2857Contig1.Arhy mRNA sequence NA coding protein psRNATarget
EZ721387.1
ncRNA:21   ACUUUACGACAGUAACUAACU   1
  |*|||*|||||||||*|||||
targets:102   UCAAAAGCUGUCAUUCAUUGA   122

2.5 TSA: Arachis hypogaea CL1Contig403.Arhy mRNA sequence NA coding protein psRNATarget
EZ723058.1
ncRNA:21   ACUUUACGACAGUAACUAACU   1
  |*|||*|||||||||*|||||
targets:66   UCAAAAGCUGUCAUUCAUUGA   86

2.5 TSA: Arachis hypogaea CL1Contig2074.Arhy mRNA sequence NA coding protein psRNATarget

Reference

1 PMID:20047695
"Deep sequencing identifies novel and conserved microRNAs in peanuts (Arachis hypogaea L.)";
Zhao CZ, Xia H, Frazier TP, Yao YY, Bi YP, Li AQ, Li MJ, Li CS, Zhang BH, Wang XJ;
BMC Plant Biol. 10:3(2010).