ncRNA ID | ahy-miR3519 |
Species | Arachis hypogaea |
Class | miRNA |
Genome position | NA |
Reference genome | NA |
Source | miRBase |
Length | 21 |
Mature sequence(if miRNA) | NA - UCAAUCAAUGACAGCAUUUCA - NA |
Stem-loop(if miRNA) |
---GA    UG   A    GCU     -       AGUUCUAAACUUUUU     AAU      UGAA  GCU UCAU   UUGAG UGUUGUG               CUGUG   A      ||||  ||| ||||   ||||| |||||||               |||||      ACUU  CGA AGUA   AACUU ACGAUAC               GACAC   U UGUUA    UA   C    ACU     G       ----------GUUUU     AUA |
Stem-loop sequence | GAUGAAUGGCUAUCAUGCUUUGAGUGUUGUGAGUUCUAAACUUUUUCUGUGAAUAUAUACACAGUUUUGCAUAGCAGUUCAAUCAAUGACAGCAUUUCAAUUGU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
EZ736979.1 |
|
0.0 | TSA: Arachis hypogaea CL2857Contig1.Arhy mRNA sequence | NA | coding protein | psRNATarget | |||||||||
EZ721387.1 |
|
2.5 | TSA: Arachis hypogaea CL1Contig403.Arhy mRNA sequence | NA | coding protein | psRNATarget | |||||||||
EZ723058.1 |
|
2.5 | TSA: Arachis hypogaea CL1Contig2074.Arhy mRNA sequence | NA | coding protein | psRNATarget |
1 | PMID:20047695
"Deep sequencing identifies novel and conserved microRNAs in peanuts (Arachis hypogaea L.)"; Zhao CZ, Xia H, Frazier TP, Yao YY, Bi YP, Li AQ, Li MJ, Li CS, Zhang BH, Wang XJ; BMC Plant Biol. 10:3(2010). |