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BaseInfo

ncRNA ID novel_gma_miR7644
Species Glycine max
Class miRNA
Genome position Chr13:41935017-41935148 [+]
Reference genome Glycine_max_v2.0
Source SRR1451612
Length 22
Mature sequence(if miRNA) 1 - UUGAUUGGUUGAAAUUUAUUGC - 22
Stem-loop(if miRNA) --                                  CUA   A  C       ACAUUU  UUAUUC
  UUGAUUGGUUGAAAUUUAUUGCAAAUCACCAAUU   GUG GU CCACAUC      GA      U
  ||||||||||||||||||||||||||||||||||   ||| || |||||||      ||
  AACUAACUAACUUUAAAUAACGUUUAGUGGUUAA   CGC CA GGUGUAG      AG      C
GA                                  AAC   C  A       --AUUU  UCCUCU
Stem-loop sequence UUGAUUGGUUGAAAUUUAUUGCAAAUCACCAAUUCUAGUGAGUCCCACAUCACAUUUGAUUAUUCUCUCUCCUGAUUUAGAUGUGGAACCCGCCAAAAUUGGUGAUUUGCAAUAAAUUUCAAUCAAUCAAAG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003543086.3
ncRNA:22   CGUUAUUUAAAGUUGGUUAGUU   1
  *=||||*|||||||||||*|||
targets:1722   UUAAUAUAUUUCAACCAACCAA   1743

2.5 PREDICTED: Glycine max anthocyanidin 3-O-glucosyltransferase 7-like (LOC100807224), mRNA anthocyanidin 3-O-glucosyltransferase 7-like(LOC100807224) coding protein psRNATarget
XM_014764483.1
ncRNA:22   CGUUAUUUAAAGUUGGUUAGUU   1
  *|=||||*|||||||||||*||
targets:431   UCGAUAAUUUUCAACCAAUAAA   452

2.5 PREDICTED: Glycine max uncharacterized protein At1g01500 (LOC100784585), transcript variant X2, mRNA uncharacterized protein At1g01500(LOC100784585) coding protein psRNATarget
XM_006592038.2
ncRNA:22   CGUUAUUUAAAGUUGGUUAGUU   1
  *|=||||*|||||||||||*||
targets:431   UCGAUAAUUUUCAACCAAUAAA   452

2.5 PREDICTED: Glycine max uncharacterized protein At1g01500 (LOC100784585), transcript variant X1, mRNA uncharacterized protein At1g01500(LOC100784585) coding protein psRNATarget
XM_014762082.1
ncRNA:22   CGUUA-UUUAAAGUUGGUUAGUU   1
  *=|||-|||*|||||||||||||
targets:145   AUAAUUAAAAUUCAACCAAUCAA   167

3.0 PREDICTED: Glycine max uncharacterized LOC100776127 (LOC100776127), mRNA uncharacterized LOC100776127(LOC100776127) coding protein psRNATarget