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BaseInfo

ncRNA ID novel_gma_miR7641
Species Glycine max
Class miRNA
Genome position Chr12:14044543-14044586 [+]
Reference genome Glycine_max_v2.0
Source SRR1451612
Length 21
Mature sequence(if miRNA) 24 - UUUUGUAAAUUUUGAUGGCCU - 44
Stem-loop(if miRNA) --A  -   CU      A    A
   CC UCA  GAUUUA CAAA U
   || |||  |||||| |||| G
   GG AGU  UUAAAU GUUU U
UCC  U   -U      -    U
Stem-loop sequence ACCUCACUGAUUUAACAAAAUGUUUUUGUAAAUUUUGAUGGCCU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014778613.1
ncRNA:21   UCCGGUAGUUUUAAAUGUUUU   1
  =**||||||||||||=|||||
targets:557   GUCCCAUCAAAAUUUGCAAAA   577

2.5 PREDICTED: Glycine max uncharacterized LOC100788373 (LOC100788373), transcript variant X3, mRNA uncharacterized LOC100788373(LOC100788373) coding protein psRNATarget
XM_006595401.1
ncRNA:21   UCCGGUAGUUUUAAAUGUUUU   1
  =**||||||||*|||||||||
targets:192   GACCCAUCAAACUUUACAAAA   212

2.5 PREDICTED: Glycine max dof zinc finger protein DOF3.6-like (LOC100787775), mRNA dof zinc finger protein DOF3.6-like(LOC100787775) coding protein psRNATarget
AK245531.1
ncRNA:21   UCCGGUAGUUUUAAAUGUUUU   1
  =**||||||||*|||||||||
targets:134   GACCCAUCAAACUUUACAAAA   154

2.5 Glycine max cDNA, clone: GMFL01-33-E20 NA coding protein psRNATarget
XM_003547321.3
ncRNA:21   UCCGGUAGUUUUAAAUGUUUU   1
  =**||||||||*|||||||||
targets:162   GACCCAUCAAACUUUACAAAA   182

2.5 PREDICTED: Glycine max dof zinc finger protein DOF3.6-like (LOC100775899), mRNA dof zinc finger protein DOF3.6-like(LOC100775899) coding protein psRNATarget