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BaseInfo

ncRNA ID novel_gma_miR7633
Species Glycine max
Class miRNA
Genome position Chr12:5352324-5352409 [+]
Reference genome Glycine_max_v2.0
Source SRR1451612
Length 23
Mature sequence(if miRNA) 64 - AGAUCAAGUUGAUCCGUAUGACU - 86
Stem-loop(if miRNA) --G                       G      A        A
   CAUACGGAUCAACUUGAUUUGUA UGCUUC UACAGAUC A
   ||||||||||||||||||||||| |||||| |||||||| G
   GUAUGCCUAGUUGAACUAGAUAU ACGAAG AUGUCUAG U
UCA                       -      A        U
Stem-loop sequence GCAUACGGAUCAACUUGAUUUGUAGUGCUUCAUACAGAUCAAGUUGAUCUGUAAGAAGCAUAUAGAUCAAGUUGAUCCGUAUGACU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003547498.3
ncRNA:23   UCAGUAUGCCUAGUUGAACUAGA   1
  ||-|||||||||||||||||||*
targets:410   AG-CAUACGGAUCAACUUGAUCC   431

1.0 PREDICTED: Glycine max CBL-interacting serine/threonine-protein kinase 1-like (LOC100780524), transcript variant X1, mRNA CBL-interacting serine/threonine-protein kinase 1-like(LOC100780524) coding protein psRNATarget
XM_014768353.1
ncRNA:23   UCAGUAUGCCUAGUUGAACUAGA   1
  ||-|||||||||||||||||||*
targets:1005   AG-CAUACGGAUCAACUUGAUCC   1026

1.0 PREDICTED: Glycine max CBL-interacting serine/threonine-protein kinase 1-like (LOC100780524), transcript variant X2, mRNA CBL-interacting serine/threonine-protein kinase 1-like(LOC100780524) coding protein psRNATarget
XM_014768353.1
ncRNA:23   UCAGUAUGCCUAGUUGAACUAGA   1
  |**=*||||||||||||||||||
targets:507   AUCUUUACGGAUCAACUUGAUCU   529

1.0 PREDICTED: Glycine max CBL-interacting serine/threonine-protein kinase 1-like (LOC100780524), transcript variant X2, mRNA CBL-interacting serine/threonine-protein kinase 1-like(LOC100780524) coding protein psRNATarget
XM_006600975.2
ncRNA:23   UCAGUAUGCCUAGUUGAACUAGA   1
  ||*|*|||||||||||||||||*
targets:1247   AGCCUUACGGAUCAACUUGAUCC   1269

2.0 PREDICTED: Glycine max basic leucine zipper 9-like (LOC100776831), mRNA basic leucine zipper 9-like(LOC100776831) coding protein psRNATarget
XM_014768353.1
ncRNA:23   UCAGUAUGCCUAGUUGAACUAGA   1
  ||***||||||||||*|||||||
targets:590   AGAAUUACGGAUCAAGUUGAUCU   612

2.5 PREDICTED: Glycine max CBL-interacting serine/threonine-protein kinase 1-like (LOC100780524), transcript variant X2, mRNA CBL-interacting serine/threonine-protein kinase 1-like(LOC100780524) coding protein psRNATarget
XM_003524153.3
ncRNA:23   UCAGUAUGCCUAGUUGAACUAGA   1
  |**||||||||||||*||||||*
targets:229   AAACAUACGGAUCAAGUUGAUCC   251

2.5 PREDICTED: Glycine max uncharacterized LOC100805437 (LOC100805437), mRNA uncharacterized LOC100805437(LOC100805437) coding protein psRNATarget
XM_014770919.1
ncRNA:23   UCA--GUAUGCCUAGUUGAACUAGA   1
  |||--|*|==|||||||||||||||
targets:2149   AGUUUCUUGUGGAUCAACUUGAUCU   2173

3.0 PREDICTED: Glycine max uncharacterized LOC100800748 (LOC100800748), transcript variant X3, mRNA uncharacterized LOC100800748(LOC100800748) coding protein psRNATarget
XM_006602969.2
ncRNA:23   UCA--GUAUGCCUAGUUGAACUAGA   1
  |||--|*|==|||||||||||||||
targets:2148   AGUUUCUUGUGGAUCAACUUGAUCU   2172

3.0 PREDICTED: Glycine max uncharacterized LOC100800748 (LOC100800748), transcript variant X2, mRNA uncharacterized LOC100800748(LOC100800748) coding protein psRNATarget
XM_014770918.1
ncRNA:23   UCA--GUAUGCCUAGUUGAACUAGA   1
  |||--|*|==|||||||||||||||
targets:2148   AGUUUCUUGUGGAUCAACUUGAUCU   2172

3.0 PREDICTED: Glycine max uncharacterized LOC100800748 (LOC100800748), transcript variant X1, mRNA uncharacterized LOC100800748(LOC100800748) coding protein psRNATarget
XM_014766395.1
ncRNA:23   UCAGUAUGCCUAGUUGAACUAGA   1
  ***|||=*||||||||||||||*
targets:4075   CACCAUGAGGAUCAACUUGAUCA   4097

3.0 PREDICTED: Glycine max myb-like protein X (LOC100784525), transcript variant X2, mRNA myb-like protein X(LOC100784525) coding protein psRNATarget
XM_006574842.2
ncRNA:23   UCAGUAUGCCUAGUUGAACUAGA   1
  ***|||=*||||||||||||||*
targets:4097   CACCAUGAGGAUCAACUUGAUCA   4119

3.0 PREDICTED: Glycine max myb-like protein X (LOC100784525), transcript variant X1, mRNA myb-like protein X(LOC100784525) coding protein psRNATarget