ncRNA ID | novel_gma_miR7628 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr9:26647854-26647985 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451612;SRR1451618 |
Length | 22 |
Mature sequence(if miRNA) | 111 - UGGGACUCGCCAGUUUGACUGG - 132 |
Stem-loop(if miRNA) |
--U   A      -    UG   G  A   UG    A  G    U    GG  U   -   GCACAACA    GGG CUCGCC AGUU  ACU GC AGU  AGCU GG GAGU CCGA  GU GCA GGC        G    ||| |||||| ||||  ||| || |||  |||| || |||| ||||  || ||| |||        A    CUC GAGUGG UCGA  UGA CG UCA  UUGA CC CUCA GGUU  CA CGU CCG        A UUG   -      A    GU   G  G   GU    -  G    -    -A  -   G   AAGACGAG |
Stem-loop sequence | UGGGACUCGCCAGUUUGACUGGCAAGUUGAGCUAGGGGAGUUCCGAGGGUUGCAGGCGCACAACAGAAGAGCAGAAGCCGUGCACAUUGGACUCGCCAGUUUGACUGGCGAGUUGAGCUAGGUGAGCUCGUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_006577138.2 |
|
1.5 | PREDICTED: Glycine max uncharacterized LOC100808926 (LOC100808926), transcript variant X2, mRNA | uncharacterized LOC100808926(LOC100808926) | coding protein | psRNATarget | |||||||||
XM_006577137.2 |
|
1.5 | PREDICTED: Glycine max uncharacterized LOC100808926 (LOC100808926), transcript variant X1, mRNA | uncharacterized LOC100808926(LOC100808926) | coding protein | psRNATarget |