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BaseInfo

ncRNA ID novel_gma_miR7628
Species Glycine max
Class miRNA
Genome position Chr9:26647854-26647985 [-]
Reference genome Glycine_max_v2.0
Source SRR1451612;SRR1451618
Length 22
Mature sequence(if miRNA) 111 - UGGGACUCGCCAGUUUGACUGG - 132
Stem-loop(if miRNA) --U   A      -    UG   G  A   UG    A  G    U    GG  U   -   GCACAACA
   GGG CUCGCC AGUU  ACU GC AGU  AGCU GG GAGU CCGA  GU GCA GGC        G
   ||| |||||| ||||  ||| || |||  |||| || |||| ||||  || ||| |||        A
   CUC GAGUGG UCGA  UGA CG UCA  UUGA CC CUCA GGUU  CA CGU CCG        A
UUG   -      A    GU   G  G   GU    -  G    -    -A  -   G   AAGACGAG
Stem-loop sequence UGGGACUCGCCAGUUUGACUGGCAAGUUGAGCUAGGGGAGUUCCGAGGGUUGCAGGCGCACAACAGAAGAGCAGAAGCCGUGCACAUUGGACUCGCCAGUUUGACUGGCGAGUUGAGCUAGGUGAGCUCGUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006577138.2
ncRNA:22   GGUCAGUUUGACCGCUCAGGGU   1
  ||||||||||||||||||=|||
targets:2303   CCAGUCAAACUGGCGAGUUCCA   2324

1.5 PREDICTED: Glycine max uncharacterized LOC100808926 (LOC100808926), transcript variant X2, mRNA uncharacterized LOC100808926(LOC100808926) coding protein psRNATarget
XM_006577137.2
ncRNA:22   GGUCAGUUUGACCGCUCAGGGU   1
  ||||||||||||||||||=|||
targets:2475   CCAGUCAAACUGGCGAGUUCCA   2496

1.5 PREDICTED: Glycine max uncharacterized LOC100808926 (LOC100808926), transcript variant X1, mRNA uncharacterized LOC100808926(LOC100808926) coding protein psRNATarget