ncRNA ID | novel_gma_miR7617 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr8:29710441-29710523 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451612 |
Length | 21 |
Mature sequence(if miRNA) | 1 - UAAUUUUUUCGGUUUGUCAUA - 21 |
Stem-loop(if miRNA) |
UAAUUUUU    UU  UCAUAAACUAUUGUUACAACAAUUU         UCGG  UG                         U         ||||  ||                         A         GAUG  CC                         A UCAUUAUA    --  AUCGGUAUCGUCUUGGCUUUUGCAG |
Stem-loop sequence | UAAUUUUUUCGGUUUGUCAUAAACUAUUGUUACAACAAUUUUAAGACGUUUUCGGUUCUGCUAUGGCUACCGUAGAUAUUACU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003524591.2 |
|
1.0 | PREDICTED: Glycine max 3-ketoacyl-CoA synthase 19 (LOC100791995), mRNA | 3-ketoacyl-CoA synthase 19(LOC100791995) | coding protein | psRNATarget | |||||||||
XM_006589458.2 |
|
2.5 | PREDICTED: Glycine max uncharacterized LOC100793876 (LOC100793876), mRNA | uncharacterized LOC100793876(LOC100793876) | coding protein | psRNATarget | |||||||||
XM_003532096.3 |
|
2.5 | PREDICTED: Glycine max ethylene-responsive transcription factor 3-like (LOC100795762), mRNA | ethylene-responsive transcription factor 3-like(LOC100795762) | coding protein | psRNATarget |