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BaseInfo

ncRNA ID novel_gma_miR7617
Species Glycine max
Class miRNA
Genome position Chr8:29710441-29710523 [+]
Reference genome Glycine_max_v2.0
Source SRR1451612
Length 21
Mature sequence(if miRNA) 1 - UAAUUUUUUCGGUUUGUCAUA - 21
Stem-loop(if miRNA) UAAUUUUU    UU  UCAUAAACUAUUGUUACAACAAUUU
        UCGG  UG                         U
        ||||  ||                         A
        GAUG  CC                         A
UCAUUAUA    --  AUCGGUAUCGUCUUGGCUUUUGCAG
Stem-loop sequence UAAUUUUUUCGGUUUGUCAUAAACUAUUGUUACAACAAUUUUAAGACGUUUUCGGUUCUGCUAUGGCUACCGUAGAUAUUACU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003524591.2
ncRNA:21   AUACUGUUUGGCUUUUUUAAU   1
  ||||=||||||||||||||||
targets:1756   UAUGGCAAACCGAAAAAAUUA   1776

1.0 PREDICTED: Glycine max 3-ketoacyl-CoA synthase 19 (LOC100791995), mRNA 3-ketoacyl-CoA synthase 19(LOC100791995) coding protein psRNATarget
XM_006589458.2
ncRNA:21   AUACUGUUUGGCUUUUUUAAU   1
  ||||=||||||||=|||||||
targets:400   UAUGGCAAACCGAGAAAAUUA   420

2.5 PREDICTED: Glycine max uncharacterized LOC100793876 (LOC100793876), mRNA uncharacterized LOC100793876(LOC100793876) coding protein psRNATarget
XM_003532096.3
ncRNA:21   AUACUGUUUGGCUUUUUUAAU   1
  *|||||||||||||||||*|=
targets:1388   AAUGACAAACCGAAAAAAGUG   1408

2.5 PREDICTED: Glycine max ethylene-responsive transcription factor 3-like (LOC100795762), mRNA ethylene-responsive transcription factor 3-like(LOC100795762) coding protein psRNATarget