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BaseInfo

ncRNA ID novel_gma_miR7616
Species Glycine max
Class miRNA
Genome position Chr7:11746241-11746326 [+]
Reference genome Glycine_max_v2.0
Source SRR1451612
Length 21
Mature sequence(if miRNA) 1 - CAUUCUAAGAUGGUUGUUAGC - 21
Stem-loop(if miRNA) --CA            UG                      UGU
    UUCUAAGAUGGU  UUAGCUAAUGACUGUCUUAGAA   C
    ||||||||||||  ||||||||||||||||||||||
    AAGAUUCUGCCA  AAUUGAUUGCUGGCAGAAUCUU   C
UUGA            GU                      UCA
Stem-loop sequence CAUUCUAAGAUGGUUGUUAGCUAAUGACUGUCUUAGAAUGUCCACUUUCUAAGACGGUCGUUAGUUAAUGACCGUCUUAGAAAGUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014775607.1
ncRNA:21   CGAUUGUUGGUAGAAUCUUAC   1
  *||||=|||||||||*|||||
targets:1563   ACUAAUAACCAUCUUUGAAUG   1583

2.5 PREDICTED: Glycine max protein MOR1 (LOC102659664), transcript variant X1, mRNA protein MOR1(LOC102659664) coding protein psRNATarget
XM_014763138.1
ncRNA:21   CGAUUGUUGGUAGAAUCUUAC   1
  *||||*|||||||||||||*|
targets:1590   ACUAAAAACCAUCUUAGAAAG   1610

2.5 PREDICTED: Glycine max uncharacterized LOC100806242 (LOC100806242), transcript variant X3, mRNA uncharacterized LOC100806242(LOC100806242) coding protein psRNATarget
XM_006589010.2
ncRNA:21   CGAUUGUUGGUAGAAUCUUAC   1
  *||||*|||||||||||||*|
targets:2299   ACUAAAAACCAUCUUAGAAAG   2319

2.5 PREDICTED: Glycine max uncharacterized LOC100806242 (LOC100806242), transcript variant X2, mRNA uncharacterized LOC100806242(LOC100806242) coding protein psRNATarget