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BaseInfo

ncRNA ID novel_gma_miR7608
Species Glycine max
Class miRNA
Genome position Chr7:38383923-38384010 [-]
Reference genome Glycine_max_v2.0
Source SRR1451612
Length 21
Mature sequence(if miRNA) 68 - UUAAAAAUCGUCUUAGAAAGU - 88
Stem-loop(if miRNA) --                     CU                  U
  UUAAAAAUCGUCUUAGAAAGU  ACUUUCUAAGACGAUUUU A
  |||||||||||||||||||||  ||||||||||||||||||
  GAUUUUUAGCAGAAUCUUUCA  UGAAAGAUUCUGCUAAAA G
AG                     UC                  G
Stem-loop sequence UUAAAAAUCGUCUUAGAAAGUCUACUUUCUAAGACGAUUUUUAGGAAAAUCGUCUUAGAAAGUCUACUUUCUAAGACGAUUUUUAGGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014773193.1
ncRNA:21   UGAAAGAUUCUGCUAAAAAUU   1
  |=*||=|||||||||||||||
targets:1305   AUAUUUUAAGACGAUUUUUAA   1325

2.0 PREDICTED: Glycine max K(+) efflux antiporter 4-like (LOC100778868), transcript variant X3, mRNA K(+) efflux antiporter 4-like(LOC100778868) coding protein psRNATarget
XM_006592466.2
ncRNA:21   UGAAAGAUUCUGCUAAAAAUU   1
  |=*||=|||||||||||||||
targets:1390   AUAUUUUAAGACGAUUUUUAA   1410

2.0 PREDICTED: Glycine max K(+) efflux antiporter 4-like (LOC100778868), transcript variant X1, mRNA K(+) efflux antiporter 4-like(LOC100778868) coding protein psRNATarget
XM_014773192.1
ncRNA:21   UGAAAGAUUCUGCUAAAAAUU   1
  |=*||=|||||||||||||||
targets:1494   AUAUUUUAAGACGAUUUUUAA   1514

2.0 PREDICTED: Glycine max K(+) efflux antiporter 4-like (LOC100778868), transcript variant X2, mRNA K(+) efflux antiporter 4-like(LOC100778868) coding protein psRNATarget