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BaseInfo

ncRNA ID novel_gma_miR7594
Species Glycine max
Class miRNA
Genome position Chr6:49187494-49187544 [+]
Reference genome Glycine_max_v2.0
Source SRR1451612
Length 21
Mature sequence(if miRNA) 1 - AGAAGGUUCUUCUGGUAGAAC - 21
Stem-loop(if miRNA) A     UU  ---     U      C
 GAAGG  CU   UCUGG AGAACA A
 |||||  ||   ||||| |||||| A
 CUUCU  GA   AGGCU UCUUGU A
-     UG  AUA     U      U
Stem-loop sequence AGAAGGUUCUUCUGGUAGAACACAAAUUGUUCUUUCGGAAUAAGGUUCUUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006574210.1
ncRNA:21   CAAGAUGGUCUUCUUGGAAGA   1
  *||||=|*|||||||||||||
targets:73   CUUCUGCGAGAAGAACCUUCU   93

2.0 PREDICTED: Glycine max uncharacterized LOC102668039 (LOC102668039), mRNA uncharacterized LOC102668039(LOC102668039) coding protein psRNATarget
XM_006586476.1
ncRNA:21   CAAGAUGGUCUUCUUGGAAGA   1
  |*|=||||||||||||*||||
targets:124   GCUUUACCAGAAGAACAUUCU   144

2.5 PREDICTED: Glycine max serine/threonine-protein phosphatase 7 long form homolog (LOC102667974), mRNA serine/threonine-protein phosphatase 7 long form homolog(LOC102667974) coding protein psRNATarget
AK244332.1
ncRNA:21   CAAGAUGGUCUUCUUGGAAGA   1
  |*|=||||||*||||||||||
targets:371   GAUUUACCAGCAGAACCUUCU   391

2.5 Glycine max cDNA, clone: GMFL01-02-L15 NA coding protein psRNATarget
XM_003547422.3
ncRNA:21   CAAGAUGGUCUUCUUGGAAGA   1
  *||||*|||*|||||||||||
targets:426   CUUCUCCCACAAGAACCUUCU   446

2.5 PREDICTED: Glycine max exocyst complex component EXO70B1-like (LOC100801773), mRNA exocyst complex component EXO70B1-like(LOC100801773) coding protein psRNATarget
XM_006596704.2
ncRNA:21   CAAGAUGGUCUUCUUGGAAGA   1
  *|||*=|*|||||||||||||
targets:82   CUUCCGCGAGAAGAACCUUCU   102

3.0 PREDICTED: Glycine max serine/threonine-protein phosphatase 7 long form homolog (LOC102666208), mRNA serine/threonine-protein phosphatase 7 long form homolog(LOC102666208) coding protein psRNATarget
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