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BaseInfo

ncRNA ID novel_gma_miR7587
Species Glycine max
Class miRNA
Genome position Chr5:10913894-10913995 [+]
Reference genome Glycine_max_v2.0
Source SRR1451612
Length 21
Mature sequence(if miRNA) 1 - UUUGGAUUUGAUAUACUUCUA - 21
Stem-loop(if miRNA) --                  C  AAA                ------    UA
  UUUGGAUUUGAUAUACUU UA   GUGUAACUUGUUUAAU      CUAA  A
  |||||||||||||||||| ||   ||||||||||||||||      ||||
  AAACCUAAACUAUAUGAA AU   CACAUUGAACAAAUUA      GAUU  C
UA                  U  CUC                UAUGAG    UU
Stem-loop sequence UUUGGAUUUGAUAUACUUCUAAAAGUGUAACUUGUUUAAUCUAAUAACUUUUAGGAGUAUAUUAAACAAGUUACACCUCUAUAAGUAUAUCAAAUCCAAAAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006590253.2
ncRNA:21   AUCUUCAUAUAGUUUAGGUUU   1
  |||*|||||*|||||||||||
targets:100   UAGUAGUAUUUCAAAUCCAAA   120

2.5 PREDICTED: Glycine max squamosa promoter-binding-like protein 12-like (LOC100796013), transcript variant X3, mRNA squamosa promoter-binding-like protein 12-like(LOC100796013) coding protein psRNATarget
BT093004.1
ncRNA:21   AUCUUCAUAUAGUUUAGGUUU   1
  *||*||||||||||*||||||
targets:98   AAGUAGUAUAUCAACUCCAAA   118

2.5 Soybean clone JCVI-FLGm-26N24 unknown mRNA NA coding protein psRNATarget
XM_003517962.3
ncRNA:21   AUCUUCAUAUAGUUUAGGUUU   1
  *||||*|||||*|||||||||
targets:53   AAGAAUUAUAUAAAAUCCAAA   73

2.5 PREDICTED: Glycine max NAC domain-containing protein 8-like (LOC100799488), mRNA NAC domain-containing protein 8-like(LOC100799488) coding protein psRNATarget
XM_003539895.3
ncRNA:21   AUCUUCAUAUAGUUUAGGUUU   1
  *****||||||||||||||||
targets:2157   ACUCUGUAUAUCAAAUCCAAA   2177

3.0 PREDICTED: Glycine max 26S proteasome non-ATPase regulatory subunit 2 homolog A (LOC100777078), mRNA 26S proteasome non-ATPase regulatory subunit 2 homolog A(LOC100777078) coding protein psRNATarget
XM_003527371.3
ncRNA:21   AUCUUCAUAUAGUUUAGGUUU   1
  *****||||||||||||||||
targets:2161   ACUCUGUAUAUCAAAUCCAAA   2181

3.0 PREDICTED: Glycine max 26S proteasome non-ATPase regulatory subunit 2 homolog A (LOC100799779), mRNA 26S proteasome non-ATPase regulatory subunit 2 homolog A(LOC100799779) coding protein psRNATarget