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BaseInfo

ncRNA ID novel_gma_miR7585
Species Glycine max
Class miRNA
Genome position Chr5:20318451-20318612 [-]
Reference genome Glycine_max_v2.0
Source SRR1451612
Length 22
Mature sequence(if miRNA) 141 - UUAACAAGUGAUGUUGACUGCC - 162
Stem-loop(if miRNA) --                              C     U     A      UUG    GUGUCAUGUUCUGAUUAGAUGUCA
  UUAACAAGUGAUGUUGACUGCCAUGUGUCA GUUCU AUUGG UGAUGA   UCAC                        A
  |||||||||||||||||||||||||||||| ||||| ||||| ||||||   ||||                        C
  AAUUGUUCACUACAAUUGAUGGUGCACAGU CAAGA UAACC GUUACU   UUUG                        U
GC                              A     U     A      ---    UUAUUAAGUAAAGUGGAAAGUACC
Stem-loop sequence UUAACAAGUGAUGUUGACUGCCAUGUGUCACGUUCUUAUUGGAUGAUGAUUGUCACGUGUCAUGUUCUGAUUAGAUGUCAACUCCAUGAAAGGUGAAAUGAAUUAUUGUUUUCAUUGACCAAUUAGAACAUGACACGUGGUAGUUAACAUCACUUGUUAACG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006602607.2
ncRNA:22   CCGUCAGUUGUAGUGAACAAUU   1
  |*||||||||||||||||*|||
targets:688   GACAGUCAACAUCACUUGCUAA   709

1.5 PREDICTED: Glycine max transcription factor TGA7-like (LOC100794752), mRNA transcription factor TGA7-like(LOC100794752) coding protein psRNATarget
XM_014766872.1
ncRNA:22   CCGUCAGUUGUAGUGAACAAUU   1
  |**|*||||||||||||||||=
targets:2528   GUAAAUCAACAUCACUUGUUAG   2549

2.0 PREDICTED: Glycine max tRNA(adenine(34)) deaminase, chloroplastic-like (LOC100795980), transcript variant X3, mRNA tRNA(adenine(34)) deaminase, chloroplastic-like(LOC100795980) coding protein psRNATarget
XM_003520108.3
ncRNA:22   CCGUCAGUUGUAGUGAACAAUU   1
  |**|*||||||||||||||||=
targets:2297   GUAAAUCAACAUCACUUGUUAG   2318

2.0 PREDICTED: Glycine max tRNA(adenine(34)) deaminase, chloroplastic-like (LOC100795980), transcript variant X2, mRNA tRNA(adenine(34)) deaminase, chloroplastic-like(LOC100795980) coding protein psRNATarget
XM_006574941.2
ncRNA:22   CCGUCAGUUGUAGUGAACAAUU   1
  |**|*||||||||||||||||=
targets:2350   GUAAAUCAACAUCACUUGUUAG   2371

2.0 PREDICTED: Glycine max tRNA(adenine(34)) deaminase, chloroplastic-like (LOC100795980), transcript variant X1, mRNA tRNA(adenine(34)) deaminase, chloroplastic-like(LOC100795980) coding protein psRNATarget
XM_003536515.3
ncRNA:22   CCGUCAGUUGUAGUGAACAAUU   1
  *||*||||||||||=|||||||
targets:2268   AGCCGUCAACAUCAUUUGUUAA   2289

2.5 PREDICTED: Glycine max putative receptor-like protein kinase At4g00960 (LOC100796158), mRNA putative receptor-like protein kinase At4g00960(LOC100796158) coding protein psRNATarget
XM_006581075.2
ncRNA:22   CCGUCAGUUGUAGUGAACAAUU   1
  *|||*|*|=|||||||||||||
targets:1467   UGCACUGAGCAUCACUUGUUAA   1488

3.0 PREDICTED: Glycine max protein NLP4-like (LOC100785135), transcript variant X2, mRNA protein NLP4-like(LOC100785135) coding protein psRNATarget
XM_014774409.1
ncRNA:22   CCGUCAGUUGUAGUGAACAAUU   1
  *|||*|*|=|||||||||||||
targets:1466   UGCACUGAGCAUCACUUGUUAA   1487

3.0 PREDICTED: Glycine max protein NLP4-like (LOC100790922), transcript variant X8, mRNA protein NLP4-like(LOC100790922) coding protein psRNATarget
XM_006577875.2
ncRNA:22   CCGUCAGUUGUAGUGAACAAUU   1
  *|||*|*|=|||||||||||||
targets:1466   UGCACUGAGCAUCACUUGUUAA   1487

3.0 PREDICTED: Glycine max protein NLP4-like (LOC100790922), transcript variant X7, mRNA protein NLP4-like(LOC100790922) coding protein psRNATarget
XM_006577873.2
ncRNA:22   CCGUCAGUUGUAGUGAACAAUU   1
  *|||*|*|=|||||||||||||
targets:1469   UGCACUGAGCAUCACUUGUUAA   1490

3.0 PREDICTED: Glycine max protein NLP4-like (LOC100790922), transcript variant X1, mRNA protein NLP4-like(LOC100790922) coding protein psRNATarget
XM_014774408.1
ncRNA:22   CCGUCAGUUGUAGUGAACAAUU   1
  *|||*|*|=|||||||||||||
targets:1553   UGCACUGAGCAUCACUUGUUAA   1574

3.0 PREDICTED: Glycine max protein NLP4-like (LOC100790922), transcript variant X6, mRNA protein NLP4-like(LOC100790922) coding protein psRNATarget
XM_006577876.2
ncRNA:22   CCGUCAGUUGUAGUGAACAAUU   1
  *|||*|*|=|||||||||||||
targets:1556   UGCACUGAGCAUCACUUGUUAA   1577

3.0 PREDICTED: Glycine max protein NLP4-like (LOC100790922), transcript variant X5, mRNA protein NLP4-like(LOC100790922) coding protein psRNATarget
XM_006581076.2
ncRNA:22   CCGUCAGUUGUAGUGAACAAUU   1
  *|||*|*|=|||||||||||||
targets:1606   UGCACUGAGCAUCACUUGUUAA   1627

3.0 PREDICTED: Glycine max protein NLP4-like (LOC100785135), transcript variant X3, mRNA protein NLP4-like(LOC100785135) coding protein psRNATarget
XM_003527593.3
ncRNA:22   CCGUCAGUUGUAGUGAACAAUU   1
  *|||*|*|=|||||||||||||
targets:1609   UGCACUGAGCAUCACUUGUUAA   1630

3.0 PREDICTED: Glycine max protein NLP4-like (LOC100785135), transcript variant X1, mRNA protein NLP4-like(LOC100785135) coding protein psRNATarget
XM_006577874.2
ncRNA:22   CCGUCAGUUGUAGUGAACAAUU   1
  *|||*|*|=|||||||||||||
targets:1639   UGCACUGAGCAUCACUUGUUAA   1660

3.0 PREDICTED: Glycine max protein NLP4-like (LOC100790922), transcript variant X3, mRNA protein NLP4-like(LOC100790922) coding protein psRNATarget
XM_003523029.3
ncRNA:22   CCGUCAGUUGUAGUGAACAAUU   1
  *|||*|*|=|||||||||||||
targets:1656   UGCACUGAGCAUCACUUGUUAA   1677

3.0 PREDICTED: Glycine max protein NLP4-like (LOC100790922), transcript variant X4, mRNA protein NLP4-like(LOC100790922) coding protein psRNATarget
XM_006577872.2
ncRNA:22   CCGUCAGUUGUAGUGAACAAUU   1
  *|||*|*|=|||||||||||||
targets:1659   UGCACUGAGCAUCACUUGUUAA   1680

3.0 PREDICTED: Glycine max protein NLP4-like (LOC100790922), transcript variant X2, mRNA protein NLP4-like(LOC100790922) coding protein psRNATarget
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