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BaseInfo

ncRNA ID novel_gma_miR7584
Species Glycine max
Class miRNA
Genome position Chr5:19171743-19171861 [+]
Reference genome Glycine_max_v2.0
Source SRR1451612
Length 21
Mature sequence(if miRNA) 1 - UCCAUUGGAGUUUGUAGGCCU - 21
Stem-loop(if miRNA) --   A       -U    GG    --GGA        A  AA  GAG   U     UCUUGA
  UCC UUGGAGU  UGUA  CCUU     UCUUCUUC UC  UG   UCC UUGCU      A
  ||| |||||||  ||||  ||||     |||||||| ||  ||   ||| |||||
  AGG AACUUCA  GCAU  GGAG     AGAAGAAG AG  AU   AGG AACGG      U
AG   -       CC    -A    AGUUG        A  AG  --A   U     UAAUUU
Stem-loop sequence UCCAUUGGAGUUUGUAGGCCUUGGAUCUUCUUCAUCAAUGGAGUCCUUUGCUUCUUGAAUUUUAAUGGCAAUGGAAUAGAGAAGAAGAAGAGUUGAGAGGAUACGCCACUUCAAGGAGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
BT095722.1
ncRNA:21   UCCGGAUGUUUGAGGUUACCU   1
  ||||||||||=||||||||||
targets:105   AGGCCUACAAGCUCCAAUGGA   125

1.5 Soybean clone JCVI-FLGm-15I19 unknown mRNA NA coding protein psRNATarget
XM_006587612.2
ncRNA:21   UCCGGAUGUUUGAGGUUACCU   1
  ||||||||||=||||||||||
targets:73   AGGCCUACAAGCUCCAAUGGA   93

1.5 PREDICTED: Glycine max maltose excess protein 1, chloroplastic-like (LOC102668505), transcript variant X2, mRNA maltose excess protein 1, chloroplastic-like(LOC102668505) coding protein psRNATarget
XM_006587611.2
ncRNA:21   UCCGGAUGUUUGAGGUUACCU   1
  ||||||||||=||||||||||
targets:78   AGGCCUACAAGCUCCAAUGGA   98

1.5 PREDICTED: Glycine max maltose excess protein 1, chloroplastic-like (LOC102668505), transcript variant X1, mRNA maltose excess protein 1, chloroplastic-like(LOC102668505) coding protein psRNATarget
AK286453.1
ncRNA:21   UCCGGAUGUUUGAGGUUACCU   1
  |||||||=||=||||||||||
targets:1559   AGGCCUAUAAGCUCCAAUGGA   1579

2.5 Glycine max cDNA, clone: GMFL01-28-L19 NA coding protein psRNATarget