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BaseInfo

ncRNA ID novel_gma_miR7581
Species Glycine max
Class miRNA
Genome position Chr4:7649144-7649216 [-]
Reference genome Glycine_max_v2.0
Source SRR1451612
Length 24
Mature sequence(if miRNA) 50 - AGAUCAACUUGAUUCGUAAGGCUU - 73
Stem-loop(if miRNA) --       C  G                      A
  AGAUCAA UU AUUCGUAAGGCUUAUACGGAUC G
  ||||||| || |||||||||||||||||||||| G
  UCUAGUU AA UAGGCAUUCUGAAUAUGCCUAG U
UG       C  G                      U
Stem-loop sequence AGAUCAACUUGAUUCGUAAGGCUUAUACGGAUCAGGUUGAUCCGUAUAAGUCUUACGGAUGAACUUGAUCUGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014768353.1
ncRNA:24   UUCGGAAUGCUUAGUUCAACUAGA   1
  |||**|||||=|||||||||||||
targets:589   AAGAAUUACGGAUCAAGUUGAUCU   612

1.0 PREDICTED: Glycine max CBL-interacting serine/threonine-protein kinase 1-like (LOC100780524), transcript variant X2, mRNA CBL-interacting serine/threonine-protein kinase 1-like(LOC100780524) coding protein psRNATarget
XM_006600975.2
ncRNA:24   UUCGGAAUGCUUAGUUCAACUAGA   1
  ***=|*|||||||||||||||||*
targets:1154   CUUUCGUACGAAUCAAGUUGAUCC   1177

2.0 PREDICTED: Glycine max basic leucine zipper 9-like (LOC100776831), mRNA basic leucine zipper 9-like(LOC100776831) coding protein psRNATarget
XM_014768353.1
ncRNA:24   UUCGGAAUGCUUAGUUCAACUAGA   1
  ||*|=|||||=|||||*|||||||
targets:506   AAUCUUUACGGAUCAACUUGAUCU   529

2.5 PREDICTED: Glycine max CBL-interacting serine/threonine-protein kinase 1-like (LOC100780524), transcript variant X2, mRNA CBL-interacting serine/threonine-protein kinase 1-like(LOC100780524) coding protein psRNATarget
XM_003524153.3
ncRNA:24   UUCGGAAUGCUUAGUUCAACUAGA   1
  ||--|*||||=||||||||||||*
targets:230   AA--CAUACGGAUCAAGUUGAUCC   251

3.0 PREDICTED: Glycine max uncharacterized LOC100805437 (LOC100805437), mRNA uncharacterized LOC100805437(LOC100805437) coding protein psRNATarget