ncRNA ID | novel_gma_miR7580 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr4:8465204-8465256 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451612 |
Length | 24 |
Mature sequence(if miRNA) | 1 - UAUGAAUCAACUUGAUCGGUAAAG - 24 |
Stem-loop(if miRNA) |
--    G               C      UUAC GAUUAAGUUGAUUCA AAGU   |||| ||||||||||||||| |||C   AAUG CUAGUUCAACUAAGU UUUU GA    G               A    |
Stem-loop sequence | UUACGGAUUAAGUUGAUUCACAAGUCUUUUAUGAAUCAACUUGAUCGGUAAAG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_006593444.2 |
|
2.5 | PREDICTED: Glycine max calcium-transporting ATPase 8, plasma membrane-type-like (LOC100813841), transcript variant X11, mRNA | calcium-transporting ATPase 8, plasma membrane-type-like(LOC100813841) | coding protein | psRNATarget | |||||||||
XM_006600975.2 |
|
2.5 | PREDICTED: Glycine max basic leucine zipper 9-like (LOC100776831), mRNA | basic leucine zipper 9-like(LOC100776831) | coding protein | psRNATarget |