ncRNA ID | novel_gma_miR7570 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr4:40325871-40325991 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451612 |
Length | 22 |
Mature sequence(if miRNA) | 1 - ACGAGGAGGAUGAGAACAACUU - 22 |
Stem-loop(if miRNA) |
--                             --AA  AUUAACUUCAAGUUUUUUUUUUUG   ACGAGGAGGAUGAGAACAACUUGUAACAC    AU                        A   |||||||||||||||||||||||||||||    ||                        G   UGCUCCUCCUACUCUUGUUGAACAUUGUG    GA                        A CC                             AUUA  GAAAUCACACAUUGAUGUAGUUAG |
Stem-loop sequence | ACGAGGAGGAUGAGAACAACUUGUAACACAAAUAUUAACUUCAAGUUUUUUUUUUUGAGAGAUUGAUGUAGUUACACACUAAAGAGAUUAGUGUUACAAGUUGUUCUCAUCCUCCUCGUCC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003539797.3 |
|
2.0 | PREDICTED: Glycine max protein YLS9-like (LOC100812905), mRNA | protein YLS9-like(LOC100812905) | coding protein | psRNATarget | |||||||||
BT098602.1 |
|
2.5 | Soybean clone JCVI-FLGm-23C20 unknown mRNA | NA | coding protein | psRNATarget | |||||||||
XM_003538411.2 |
|
2.5 | PREDICTED: Glycine max chlorophyll a-b binding protein CP29.3, chloroplastic-like (LOC100794604), mRNA | chlorophyll a-b binding protein CP29.3, chloroplastic-like(LOC100794604) | coding protein | psRNATarget |