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BaseInfo

ncRNA ID novel_gma_miR7570
Species Glycine max
Class miRNA
Genome position Chr4:40325871-40325991 [+]
Reference genome Glycine_max_v2.0
Source SRR1451612
Length 22
Mature sequence(if miRNA) 1 - ACGAGGAGGAUGAGAACAACUU - 22
Stem-loop(if miRNA) --                             --AA  AUUAACUUCAAGUUUUUUUUUUUG
  ACGAGGAGGAUGAGAACAACUUGUAACAC    AU                        A
  |||||||||||||||||||||||||||||    ||                        G
  UGCUCCUCCUACUCUUGUUGAACAUUGUG    GA                        A
CC                             AUUA  GAAAUCACACAUUGAUGUAGUUAG
Stem-loop sequence ACGAGGAGGAUGAGAACAACUUGUAACACAAAUAUUAACUUCAAGUUUUUUUUUUUGAGAGAUUGAUGUAGUUACACACUAAAGAGAUUAGUGUUACAAGUUGUUCUCAUCCUCCUCGUCC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003539797.3
ncRNA:22   UUCAACAAGAGUAGGAGGAGCA   1
  **||*||*||||||||||||||
targets:149   UCGUCGUCCUCAUCCUCCUCGU   170

2.0 PREDICTED: Glycine max protein YLS9-like (LOC100812905), mRNA protein YLS9-like(LOC100812905) coding protein psRNATarget
BT098602.1
ncRNA:22   UUCAACAAGAGUAGGAGGAGCA   1
  |**||||||||||=|||||||*
targets:541   ACCUUGUUCUCAUUCUCCUCGG   562

2.5 Soybean clone JCVI-FLGm-23C20 unknown mRNA NA coding protein psRNATarget
XM_003538411.2
ncRNA:22   UUCAACAAGAGUAGGAGGAGCA   1
  |**||||||||||=|||||||*
targets:1158   ACCUUGUUCUCAUUCUCCUCGG   1179

2.5 PREDICTED: Glycine max chlorophyll a-b binding protein CP29.3, chloroplastic-like (LOC100794604), mRNA chlorophyll a-b binding protein CP29.3, chloroplastic-like(LOC100794604) coding protein psRNATarget