ncRNA ID | novel_gma_miR7559 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr2:336310-336463 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451612 |
Length | 24 |
Mature sequence(if miRNA) | 131 - UGCAUUUUUUUGUAUUACAGAUUG - 154 |
Stem-loop(if miRNA) |
--                                    ----         C     GA          U  UAUU   A   UGCAUUUUUUUGUAUUACAGAUUGCUCAAUCUGUAA    AAAAAAAUA AUUAU  AUUGAUUAAU CU    GCA A   ||||||||||||||||||||||||||||||||||||    ||||||||| |||||  |||||||||| ||    |||   AUGUAAAAAAACAUAAUGUUUAACGAGUUAGGCAUU    UUUUUUUAU UAAUG  UAAUUAGUUA GA    UGU U UU                                    AUGU         U     UC          -  -CAU   A |
Stem-loop sequence | UGCAUUUUUUUGUAUUACAGAUUGCUCAAUCUGUAAAAAAAAAUACAUUAUGAAUUGAUUAAUUCUUAUUGCAAAUAUGUUACAGAUUGAUUAAUCUGUAAUUUAUUUUUUUUGUAUUACGGAUUGAGCAAUUUGUAAUACAAAAAAAUGUAUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003550246.3 |
|
2.5 | PREDICTED: Glycine max transcription factor RAX2-like (LOC100789985), mRNA | transcription factor RAX2-like(LOC100789985) | coding protein | psRNATarget |