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BaseInfo

ncRNA ID novel_gma_miR7559
Species Glycine max
Class miRNA
Genome position Chr2:336310-336463 [-]
Reference genome Glycine_max_v2.0
Source SRR1451612
Length 24
Mature sequence(if miRNA) 131 - UGCAUUUUUUUGUAUUACAGAUUG - 154
Stem-loop(if miRNA) --                                    ----         C     GA          U  UAUU   A
  UGCAUUUUUUUGUAUUACAGAUUGCUCAAUCUGUAA    AAAAAAAUA AUUAU  AUUGAUUAAU CU    GCA A
  ||||||||||||||||||||||||||||||||||||    ||||||||| |||||  |||||||||| ||    |||
  AUGUAAAAAAACAUAAUGUUUAACGAGUUAGGCAUU    UUUUUUUAU UAAUG  UAAUUAGUUA GA    UGU U
UU                                    AUGU         U     UC          -  -CAU   A
Stem-loop sequence UGCAUUUUUUUGUAUUACAGAUUGCUCAAUCUGUAAAAAAAAAUACAUUAUGAAUUGAUUAAUUCUUAUUGCAAAUAUGUUACAGAUUGAUUAAUCUGUAAUUUAUUUUUUUUGUAUUACGGAUUGAGCAAUUUGUAAUACAAAAAAAUGUAUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003550246.3
ncRNA:24   GUUAGACAUUAUGUUUUUUUACGU   1
  =|*|||||||*|*|||||||||||
targets:1115   UAUUCUGUAAGAAAAAAAAAUGCA   1138

2.5 PREDICTED: Glycine max transcription factor RAX2-like (LOC100789985), mRNA transcription factor RAX2-like(LOC100789985) coding protein psRNATarget