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BaseInfo

ncRNA ID novel_gma_miR7558
Species Glycine max
Class miRNA
Genome position Chr8:17454148-17454216 [+]
Reference genome Glycine_max_v2.0
Source SRR1292929
Length 22
Mature sequence(if miRNA) 48 - UCGCACGGAAGAAGGUUCUUCU - 69
Stem-loop(if miRNA) --AAA              ACU  CU       A
     AACCUUCUUCCGUG   UC  GCGGAAG A
     ||||||||||||||   ||  ||||||| G
     UUGGAAGAAGGCAC   AG  UGCCUUC U
UCUUC              GCU  AG       U
Stem-loop sequence AAAAACCUUCUUCCGUGACUUCCUGCGGAAGAAGUUCUUCCGUGAGAUCGCACGGAAGAAGGUUCUUCU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006574210.1
ncRNA:22   UCUUCUUGGAAGAAGGCACGCU   1
  |||||||||||||||||*|||*
targets:81   AGAAGAACCUUCUUCCGCGCGU   102

2.5 PREDICTED: Glycine max uncharacterized LOC102668039 (LOC102668039), mRNA uncharacterized LOC102668039(LOC102668039) coding protein psRNATarget
XM_014764743.1
ncRNA:22   UCUUCUUGGAAGAAGGCACGCU   1
  ||||||||||||||||*||||*
targets:18   AGAAGAACCUUCUUCCAUGCGU   39

2.5 PREDICTED: Glycine max serine/threonine-protein phosphatase 7 long form homolog (LOC102664703), mRNA serine/threonine-protein phosphatase 7 long form homolog(LOC102664703) coding protein psRNATarget
XM_006580673.1
ncRNA:22   UCUUCUUGGAAGAAGGCACGCU   1
  |||||||||||||||||*|||*
targets:51   AGAAGAACCUUCUUCCGGGCGU   72

2.5 PREDICTED: Glycine max uncharacterized LOC102669003 (LOC102669003), mRNA uncharacterized LOC102669003(LOC102669003) coding protein psRNATarget