ncRNA ID | novel_gma_miR7556 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr2:5381872-5382078 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451612 |
Length | 21 |
Mature sequence(if miRNA) | 187 - UUGUGAUUGCAGCCAACUGAA - 207 |
Stem-loop(if miRNA) |
--           --G          C        C       GG            CCAA            --         CC        U      AAUUA   UUGUGAUUGCA   CCAACUGAAU UUCACUUU UCAUUGU  UCAGCAGUUCAA    UGGCUUAAGAGA  AAAUAUGUU  AUUACUUU AUUUAU     U   |||||||||||   |||||||||| |||||||| |||||||  ||||||||||||    ||||||||||||  |||||||||  |||||||| ||||||   AACACUAACGU   GGUUGACUUA AGGUGAAA AGUGACA  AGUUGUCAAGUU    ACCGAAUUCUCU  UUUAUACAA  UAAUGAAA UAAAUA     U AC           AGG          C        U       GA            CAUA            AU         AC        -      AAGGA |
Stem-loop sequence | UUGUGAUUGCAGCCAACUGAAUCUUCACUUUCUCAUUGUGGUCAGCAGUUCAACCAAUGGCUUAAGAGAAAAUAUGUUCCAUUACUUUUAUUUAUAAUUAUUAGGAAAUAAAUAAAGUAAUCAAACAUAUUUUAUCUCUUAAGCCAAUACUUGAACUGUUGAAGACAGUGAUAAAGUGGACAUUCAGUUGGGGAUGCAAUCACAACA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_014766223.1 |
|
3.0 | PREDICTED: Glycine max uncharacterized LOC100779421 (LOC100779421), mRNA | uncharacterized LOC100779421(LOC100779421) | coding protein | psRNATarget |