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BaseInfo

ncRNA ID novel_gma_miR7556
Species Glycine max
Class miRNA
Genome position Chr2:5381872-5382078 [-]
Reference genome Glycine_max_v2.0
Source SRR1451612
Length 21
Mature sequence(if miRNA) 187 - UUGUGAUUGCAGCCAACUGAA - 207
Stem-loop(if miRNA) --           --G          C        C       GG            CCAA            --         CC        U      AAUUA
  UUGUGAUUGCA   CCAACUGAAU UUCACUUU UCAUUGU  UCAGCAGUUCAA    UGGCUUAAGAGA  AAAUAUGUU  AUUACUUU AUUUAU     U
  |||||||||||   |||||||||| |||||||| |||||||  ||||||||||||    ||||||||||||  |||||||||  |||||||| ||||||
  AACACUAACGU   GGUUGACUUA AGGUGAAA AGUGACA  AGUUGUCAAGUU    ACCGAAUUCUCU  UUUAUACAA  UAAUGAAA UAAAUA     U
AC           AGG          C        U       GA            CAUA            AU         AC        -      AAGGA
Stem-loop sequence UUGUGAUUGCAGCCAACUGAAUCUUCACUUUCUCAUUGUGGUCAGCAGUUCAACCAAUGGCUUAAGAGAAAAUAUGUUCCAUUACUUUUAUUUAUAAUUAUUAGGAAAUAAAUAAAGUAAUCAAACAUAUUUUAUCUCUUAAGCCAAUACUUGAACUGUUGAAGACAGUGAUAAAGUGGACAUUCAGUUGGGGAUGCAAUCACAACA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014766223.1
ncRNA:21   AAGUCAACCGACGUUAGUGUU   1
  |||**|||||||||||||||*
targets:2268   UUCCAUUGGCUGCAAUCACAU   2288

3.0 PREDICTED: Glycine max uncharacterized LOC100779421 (LOC100779421), mRNA uncharacterized LOC100779421(LOC100779421) coding protein psRNATarget