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BaseInfo

ncRNA ID	novel_gma_miR7554
Species	Glycine max
Class	miRNA
Genome position	Chr2:17387472-17387616 [-]
Reference genome	Glycine_max_v2.0
Source	SRR1451612
Length	20
Mature sequence(if miRNA)	126 - CACCAAUCUGUGCCUCUUCC - 145
Stem-loop(if miRNA)	--             C        C                    C     -  C    C         CUAC   CACCAAUCUGUGC UCUUCCUC UCUACCAGCUCAAUAUCUUU GUUUC AC UUUG UUUUGUAAA    A   ||||||||||||| |||||||| |||||||||||||||||||| ||||| || |||| |||||||||    C   GUGGUUAGACACG AGAAGGAG AGAUGGUCGAGUUAUAGAAA CAAAG UG AAAC AAAACAUUU    U UU             A        C                    U     C  A    -         AAAG
Stem-loop sequence	CACCAAUCUGUGCCUCUUCCUCCUCUACCAGCUCAAUAUCUUUCGUUUCACCUUUGCUUUUGUAAACUACACUGAAAUUUACAAAACAAAAGUCGAAACUAAAGAUAUUGAGCUGGUAGACGAGGAAGAAGCACAGAUUGGUGUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_006606429.2	ncRNA:20   CCUUCUCCGUGUCUAACCAC   1   ||*|||||||||||*||||| targets:484   GGUAGAGGCACAGAAUGGUG   503 Target Full Sequence	2.5	PREDICTED: Glycine max probable serine/threonine-protein kinase At1g54610 (LOC100819318), transcript variant X4, mRNA	probable serine/threonine-protein kinase At1g54610(LOC100819318)	coding protein	psRNATarget
XM_006606428.2	ncRNA:20   CCUUCUCCGUGUCUAACCAC   1   ||*|||||||||||*||||| targets:443   GGUAGAGGCACAGAAUGGUG   462 Target Full Sequence	2.5	PREDICTED: Glycine max probable serine/threonine-protein kinase At1g54610 (LOC100819318), transcript variant X3, mRNA	probable serine/threonine-protein kinase At1g54610(LOC100819318)	coding protein	psRNATarget
XM_003556442.3	ncRNA:20   CCUUCUCCGUGUCUAACCAC   1   ||*|||||||||||*||||| targets:484   GGUAGAGGCACAGAAUGGUG   503 Target Full Sequence	2.5	PREDICTED: Glycine max probable serine/threonine-protein kinase At1g54610 (LOC100819318), transcript variant X1, mRNA	probable serine/threonine-protein kinase At1g54610(LOC100819318)	coding protein	psRNATarget
XM_006606427.2	ncRNA:20   CCUUCUCCGUGUCUAACCAC   1   ||*|||||||||||*||||| targets:674   GGUAGAGGCACAGAAUGGUG   693 Target Full Sequence	2.5	PREDICTED: Glycine max probable serine/threonine-protein kinase At1g54610 (LOC100819318), transcript variant X2, mRNA	probable serine/threonine-protein kinase At1g54610(LOC100819318)	coding protein	psRNATarget
XM_014769888.1	ncRNA:20   CCUUCUCCGUGUCUAACCAC   1   *|||||*|||||||*||||| targets:3439   CGAAGAAGCACAGAGUGGUG   3458 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC100792447 (LOC100792447), mRNA	uncharacterized LOC100792447(LOC100792447)	coding protein	psRNATarget
XM_006591011.2	ncRNA:20   CCUUCUCCGUGUCUAACCAC   1   |||||=*||||||||||||* targets:182   GGAAGGUGCACAGAUUGGUA   201 Target Full Sequence	3.0	PREDICTED: Glycine max nucleolin-like (LOC100785076), transcript variant X1, mRNA	nucleolin-like(LOC100785076)	coding protein	psRNATarget
XM_006592266.2	ncRNA:20   CCUUCUCCGUGUCUAACCAC   1   |||||=*||||||||||||* targets:289   GGAAGGUGCACAGAUUGGUA   308 Target Full Sequence	3.0	PREDICTED: Glycine max heterogeneous nuclear ribonucleoprotein R-like (LOC100806658), transcript variant X2, mRNA	heterogeneous nuclear ribonucleoprotein R-like(LOC100806658)	coding protein	psRNATarget