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BaseInfo

ncRNA ID novel_gma_miR7545
Species Glycine max
Class miRNA
Genome position Chr2:30894680-30894796 [+]
Reference genome Glycine_max_v2.0
Source SRR1451611
Length 21
Mature sequence(if miRNA) 97 - ACUUUCUACAUCGGUUUUGGC - 117
Stem-loop(if miRNA) --       A                                 CCAAAACCGAUAU        
  CAAAACC AUGUAGAAAGUGCCUUUACAAUAUUGGUUUUUG             UGUAAAGAC
  ||||||| |||||||||||||||||||||||||||||||||             ||||||||A
  GUUUUGG UACAUCUUUCACGGAAAUGUUAUAACCAAAAGC             ACAUUUUUC
CG       C                                 ------------U        
Stem-loop sequence CAAAACCAAUGUAGAAAGUGCCUUUACAAUAUUGGUUUUUGCCAAAACCGAUAUUGUAAAGACACUUUUUACAUCGAAAACCAAUAUUGUAAAGGCACUUUCUACAUCGGUUUUGGC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014767461.1
ncRNA:21   CGGUU-UUGGCUACAUCUUUCA   1
  |=|||-||||||||||||||||
targets:676   GUCAAUAACCGAUGUAGAAAGU   697

2.0 PREDICTED: Glycine max putative dual specificity protein phosphatase DSP8 (LOC100787468), transcript variant X1, mRNA putative dual specificity protein phosphatase DSP8(LOC100787468) coding protein psRNATarget
XM_014774227.1
ncRNA:21   CGGUUUUGGCUACAUCUUUCA   1
  |=||*||*||||||||||||*
targets:47   GUCAUAAGCGAUGUAGAAAGG   67

3.0 PREDICTED: Glycine max uncharacterized LOC106798245 (LOC106798245), mRNA uncharacterized LOC106798245(LOC106798245) coding protein psRNATarget