ncRNA ID | novel_gma_miR7545 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr2:30894680-30894796 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451611 |
Length | 21 |
Mature sequence(if miRNA) | 97 - ACUUUCUACAUCGGUUUUGGC - 117 |
Stem-loop(if miRNA) |
--       A                                 CCAAAACCGAUAU           CAAAACC AUGUAGAAAGUGCCUUUACAAUAUUGGUUUUUG             UGUAAAGAC   ||||||| |||||||||||||||||||||||||||||||||             ||||||||A   GUUUUGG UACAUCUUUCACGGAAAUGUUAUAACCAAAAGC             ACAUUUUUC CG       C                                 ------------U         |
Stem-loop sequence | CAAAACCAAUGUAGAAAGUGCCUUUACAAUAUUGGUUUUUGCCAAAACCGAUAUUGUAAAGACACUUUUUACAUCGAAAACCAAUAUUGUAAAGGCACUUUCUACAUCGGUUUUGGC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_014767461.1 |
|
2.0 | PREDICTED: Glycine max putative dual specificity protein phosphatase DSP8 (LOC100787468), transcript variant X1, mRNA | putative dual specificity protein phosphatase DSP8(LOC100787468) | coding protein | psRNATarget | |||||||||
XM_014774227.1 |
|
3.0 | PREDICTED: Glycine max uncharacterized LOC106798245 (LOC106798245), mRNA | uncharacterized LOC106798245(LOC106798245) | coding protein | psRNATarget |