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BaseInfo

ncRNA ID	novel_gma_miR7544
Species	Glycine max
Class	miRNA
Genome position	Chr2:1790168-1790274 [+]
Reference genome	Glycine_max_v2.0
Source	SRR1451611
Length	21
Mature sequence(if miRNA)	87 - UUGAAGUGUUUGGGGGAACUC - 107
Stem-loop(if miRNA)	--       UG          AUAUUGA   GCUAGCUAGUCUAAACUUGUACCCG   GUUCCCC  AACGCUUCAA       UAG                         C   |||||||  ||||||||||       |||                         U   CAAGGGG  UUGUGAAGUU       AAC                         A CU       GU          ------C   CUUGUUCAUUAAUUAUAAUCCGGAU
Stem-loop sequence	GUUCCCCUGAACGCUUCAAAUAUUGAUAGGCUAGCUAGUCUAAACUUGUACCCGCUAUAGGCCUAAUAUUAAUUACUUGUUCCAACUUGAAGUGUUUGGGGGAACUC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_003531315.2	ncRNA:21   CUCAAGGGGGUUUGUGAAGUU   1   ||||||=|||||||||||||| targets:145   GAGUUCUCCCAAACACUUCAA   165 Target Full Sequence	1.0	PREDICTED: Glycine max sulfate transporter 2.1-like (LOC100775538), mRNA	sulfate transporter 2.1-like(LOC100775538)	coding protein	psRNATarget
XM_014770651.1	ncRNA:21   CUCAAGGGGGUUUGUGAAGUU   1   *|||||=|||||||||||||| targets:215   AAGUUCUCCCAAACACUUCAA   235 Target Full Sequence	1.0	PREDICTED: Glycine max sulfate transporter 2.1-like (LOC100814993), mRNA	sulfate transporter 2.1-like(LOC100814993)	coding protein	psRNATarget
XM_003552772.3	ncRNA:21   CUCAAGGGGGUUUGUGAAGUU   1   *|||||=|||||||||||||| targets:108   AAGUUCUCCCAAACACUUCAA   128 Target Full Sequence	1.0	PREDICTED: Glycine max sulfate transporter 2.1-like (LOC100817831), mRNA	sulfate transporter 2.1-like(LOC100817831)	coding protein	psRNATarget
XM_003538469.3	ncRNA:21   CUCAAGGGGGUUUGUGAAGUU   1   *|||||=|||||||||||||| targets:148   AAGUUCUCCCAAACACUUCAA   168 Target Full Sequence	1.0	PREDICTED: Glycine max sulfate transporter 2.1-like (LOC100781327), mRNA	sulfate transporter 2.1-like(LOC100781327)	coding protein	psRNATarget
XM_014767214.1	ncRNA:21   CUCAAGGGGGUUUGUGAAGUU   1   *|||||*|||||||||||||| targets:515   AAGUUCACCCAAACACUUCAA   535 Target Full Sequence	1.0	PREDICTED: Glycine max low affinity sulfate transporter 3-like (LOC100776591), transcript variant X3, mRNA	low affinity sulfate transporter 3-like(LOC100776591)	coding protein	psRNATarget
XM_006596268.2	ncRNA:21   CUCAAGGGGGUUUGUGAAGUU   1   *|||||*|||||||||||||| targets:516   AAGUUCACCCAAACACUUCAA   536 Target Full Sequence	1.0	PREDICTED: Glycine max low affinity sulfate transporter 3-like (LOC100776591), transcript variant X2, mRNA	low affinity sulfate transporter 3-like(LOC100776591)	coding protein	psRNATarget
XM_006596269.2	ncRNA:21   CUCAAGGGGGUUUGUGAAGUU   1   *|||||*|||||||||||||| targets:519   AAGUUCACCCAAACACUUCAA   539 Target Full Sequence	1.0	PREDICTED: Glycine max low affinity sulfate transporter 3-like (LOC100776591), transcript variant X4, mRNA	low affinity sulfate transporter 3-like(LOC100776591)	coding protein	psRNATarget
XM_003544137.3	ncRNA:21   CUCAAGGGGGUUUGUGAAGUU   1   *|||||*|||||||||||||| targets:507   AAGUUCACCCAAACACUUCAA   527 Target Full Sequence	1.0	PREDICTED: Glycine max low affinity sulfate transporter 3-like (LOC100776591), transcript variant X1, mRNA	low affinity sulfate transporter 3-like(LOC100776591)	coding protein	psRNATarget
XM_003543724.3	ncRNA:21   CUCAAGGGGGUUUGUGAAGUU   1   *|||||*|||||||||||||= targets:330   AAGUUCACCCAAACACUUCAG   350 Target Full Sequence	2.0	PREDICTED: Glycine max low affinity sulfate transporter 3-like (LOC100798723), mRNA	low affinity sulfate transporter 3-like(LOC100798723)	coding protein	psRNATarget
XM_003526548.3	ncRNA:21   CUCAAGGGGGUUUGUGAAGUU   1   ||||||**||||||||||||| targets:259   GAGUUCAACCAAACACUUCAA   279 Target Full Sequence	2.0	PREDICTED: Glycine max low affinity sulfate transporter 3-like (LOC100805269), mRNA	low affinity sulfate transporter 3-like(LOC100805269)	coding protein	psRNATarget
XM_014770965.1	ncRNA:21   CUCAAGGGGGUUUGUGAAGUU   1   **|||=||*|||||||||||| targets:3356   UUGUUUCCGCAAACACUUCAA   3376 Target Full Sequence	2.5	PREDICTED: Glycine max callose synthase 7-like (LOC100813410), transcript variant X3, mRNA	callose synthase 7-like(LOC100813410)	coding protein	psRNATarget
XM_014770964.1	ncRNA:21   CUCAAGGGGGUUUGUGAAGUU   1   **|||=||*|||||||||||| targets:3022   UUGUUUCCGCAAACACUUCAA   3042 Target Full Sequence	2.5	PREDICTED: Glycine max callose synthase 7-like (LOC100813410), transcript variant X2, mRNA	callose synthase 7-like(LOC100813410)	coding protein	psRNATarget
XM_014770963.1	ncRNA:21   CUCAAGGGGGUUUGUGAAGUU   1   **|||=||*|||||||||||| targets:3356   UUGUUUCCGCAAACACUUCAA   3376 Target Full Sequence	2.5	PREDICTED: Glycine max callose synthase 7-like (LOC100813410), transcript variant X1, mRNA	callose synthase 7-like(LOC100813410)	coding protein	psRNATarget