ncRNA ID | novel_gma_miR7538 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr2:40023874-40023991 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451611 |
Length | 24 |
Mature sequence(if miRNA) | 1 - CGAUUGAAUGAUAAUGUAAAACUU - 24 |
Stem-loop(if miRNA) |
--CG      A        U    C  A           -    CCU   AAG     AAA     UUUACA UAUCAUUC GUCG AA UUAUCGUUUAU AUAA   UUA   UAAUU   A     |||||| |||||||| |||| || ||||||||||| ||||   |||   |||||     AAAUGU AUAGUAAG UAGC UU AGUAGUAGAUA UAUU   AAU   AUUAA   U UUCA      A        U    A  A           C    -UU   --A     AAA |
Stem-loop sequence | CGUUUACAAUAUCAUUCUGUCGCAAAUUAUCGUUUAUAUAACCUUUAAAGUAAUUAAAAUAAAAAUUAAUAAUUUUAUCAUAGAUGAUGAAUUACGAUUGAAUGAUAAUGUAAAACUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003536230.3 |
|
1.0 | PREDICTED: Glycine max transcription factor TGA4-like (LOC100777211), mRNA | transcription factor TGA4-like(LOC100777211) | coding protein | psRNATarget |