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BaseInfo

ncRNA ID novel_gma_miR7538
Species Glycine max
Class miRNA
Genome position Chr2:40023874-40023991 [-]
Reference genome Glycine_max_v2.0
Source SRR1451611
Length 24
Mature sequence(if miRNA) 1 - CGAUUGAAUGAUAAUGUAAAACUU - 24
Stem-loop(if miRNA) --CG      A        U    C  A           -    CCU   AAG     AAA
    UUUACA UAUCAUUC GUCG AA UUAUCGUUUAU AUAA   UUA   UAAUU   A
    |||||| |||||||| |||| || ||||||||||| ||||   |||   |||||
    AAAUGU AUAGUAAG UAGC UU AGUAGUAGAUA UAUU   AAU   AUUAA   U
UUCA      A        U    A  A           C    -UU   --A     AAA
Stem-loop sequence CGUUUACAAUAUCAUUCUGUCGCAAAUUAUCGUUUAUAUAACCUUUAAAGUAAUUAAAAUAAAAAUUAAUAAUUUUAUCAUAGAUGAUGAAUUACGAUUGAAUGAUAAUGUAAAACUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003536230.3
ncRNA:24   UUCAAAAUGUAAUAGUAAGUUAGC   1
  ||---||||||||||||||||||*
targets:883   AA---UUACAUUAUCAUUCAAUCA   903

1.0 PREDICTED: Glycine max transcription factor TGA4-like (LOC100777211), mRNA transcription factor TGA4-like(LOC100777211) coding protein psRNATarget