ncRNA ID | novel_gma_miR7536 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr20:33796462-33796597 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451611 |
Length | 24 |
Mature sequence(if miRNA) | 1 - CCCAAAAACCGUGACGUUGUGGCU - 24 |
Stem-loop(if miRNA) |
--C     A   G         G           U  U     C C       -----UA  CUUGAGGG    CCAAA ACC UGACGUUGU GCUGAAAUCAC GU GCAGA C UUUUUUA       AC        U    ||||| ||| ||||||||| ||||||||||| || ||||| | |||||||       ||        A    GGUUU UGG ACUGUAACG CGACUUUAGUG CA CGUCU G AAAAGAU       CU        U UGA     A   A         A           U  U     C U       UUUAAUA  ACUGAGAA |
Stem-loop sequence | CCCAAAAACCGUGACGUUGUGGCUGAAAUCACUGUUGCAGACCCUUUUUUAUAACCUUGAGGGUAUAAGAGUCAUCAUAAUUUUAGAAAAUGCUCUGCUACUGUGAUUUCAGCAGCAAUGUCAAGGUAUUUGGAGU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_006581671.2 |
|
1.5 | PREDICTED: Glycine max protein CPR-5 (LOC100791857), transcript variant X2, mRNA | protein CPR-5(LOC100791857) | coding protein | psRNATarget |