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BaseInfo

ncRNA ID novel_gma_miR7533
Species Glycine max
Class miRNA
Genome position Chr20:9210390-9210443 [-]
Reference genome Glycine_max_v2.0
Source SRR1451611
Length 22
Mature sequence(if miRNA) 33 - AAGAACAUGAAAUUUAGUGCCU - 54
Stem-loop(if miRNA) ----AA    -AU         U  C  U
      GAAC   GAAAUUUAG GC UC A
      ||||   ||||||||| || ||
      UUUG   UUUUAAGUC UG AG A
UCUUAA    AAG         -  A  A
Stem-loop sequence AAGAACAUGAAAUUUAGUGCCUCUAAAGAAGUCUGAAUUUUGAAGUUUAAUUCU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003534937.3
ncRNA:22   UCCGUGAUUUAAAGUACAAGAA   1
  |***||||=|||||||||||||
targets:39   ACAAACUAGAUUUCAUGUUCUU   60

2.0 PREDICTED: Glycine max C2 and GRAM domain-containing protein At1g03370-like (LOC100803933), mRNA C2 and GRAM domain-containing protein At1g03370-like(LOC100803933) coding protein psRNATarget