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BaseInfo

ncRNA ID novel_gma_miR7525
Species Glycine max
Class miRNA
Genome position Chr19:32832033-32832094 [-]
Reference genome Glycine_max_v2.0
Source SRR1451611
Length 22
Mature sequence(if miRNA) 41 - UAAAGAAUACUUUGUUGAUCUG - 62
Stem-loop(if miRNA) --U       A    -GUUG    GC    CA
   AAAGAAU CUUU     AUCU  UAUU  A
   ||||||| ||||     ||||  ||||  A
   UUUCUUA GAAG     UAGG  GUAA  U
CCU       -    AACUA    -A    AU
Stem-loop sequence UAAAGAAUACUUUGUUGAUCUGCUAUUCAAAUUAAAUGAGGAUAUCAAGAAGAUUCUUUUCC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006594116.2
ncRNA:22   GUCUAGUUGUUUCAUAAGAAAU   1
  ||**||=||||||||||||||=
targets:789   CAAUUCGACAAAGUAUUCUUUG   810

3.0 PREDICTED: Glycine max uncharacterized LOC102659499 (LOC102659499), transcript variant X1, mRNA uncharacterized LOC102659499(LOC102659499) coding protein psRNATarget
XM_006594117.2
ncRNA:22   GUCUAGUUGUUUCAUAAGAAAU   1
  ||**||=||||||||||||||=
targets:789   CAAUUCGACAAAGUAUUCUUUG   810

3.0 PREDICTED: Glycine max uncharacterized LOC102659499 (LOC102659499), transcript variant X2, mRNA uncharacterized LOC102659499(LOC102659499) coding protein psRNATarget
XM_006583682.2
ncRNA:22   GUCUAGUUGUUUCAUAAGAAAU   1
  ==|||**||||||||||||||*
targets:3689   UGGAUAUACAAAGUAUUCUUUC   3710

3.0 PREDICTED: Glycine max putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial (LOC100811865), transcript variant X8, mRNA putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial(LOC100811865) coding protein psRNATarget
XM_006583679.2
ncRNA:22   GUCUAGUUGUUUCAUAAGAAAU   1
  ==|||**||||||||||||||*
targets:3861   UGGAUAUACAAAGUAUUCUUUC   3882

3.0 PREDICTED: Glycine max putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial (LOC100811865), transcript variant X6, mRNA putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial(LOC100811865) coding protein psRNATarget
XM_006583681.2
ncRNA:22   GUCUAGUUGUUUCAUAAGAAAU   1
  ==|||**||||||||||||||*
targets:3735   UGGAUAUACAAAGUAUUCUUUC   3756

3.0 PREDICTED: Glycine max putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial (LOC100811865), transcript variant X7, mRNA putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial(LOC100811865) coding protein psRNATarget
XM_006583678.2
ncRNA:22   GUCUAGUUGUUUCAUAAGAAAU   1
  ==|||**||||||||||||||*
targets:3763   UGGAUAUACAAAGUAUUCUUUC   3784

3.0 PREDICTED: Glycine max putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial (LOC100811865), transcript variant X5, mRNA putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial(LOC100811865) coding protein psRNATarget
XM_006583674.2
ncRNA:22   GUCUAGUUGUUUCAUAAGAAAU   1
  ==|||**||||||||||||||*
targets:3940   UGGAUAUACAAAGUAUUCUUUC   3961

3.0 PREDICTED: Glycine max putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial (LOC100811865), transcript variant X3, mRNA putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial(LOC100811865) coding protein psRNATarget
XM_006583676.2
ncRNA:22   GUCUAGUUGUUUCAUAAGAAAU   1
  ==|||**||||||||||||||*
targets:3814   UGGAUAUACAAAGUAUUCUUUC   3835

3.0 PREDICTED: Glycine max putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial (LOC100811865), transcript variant X4, mRNA putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial(LOC100811865) coding protein psRNATarget