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BaseInfo

ncRNA ID novel_gma_miR7524
Species Glycine max
Class miRNA
Genome position Chr19:45981432-45981567 [-]
Reference genome Glycine_max_v2.0
Source SRR1451611
Length 21
Mature sequence(if miRNA) 116 - CAUCGAACAUUUUGGUCCCUA - 136
Stem-loop(if miRNA) --                    -A     -C       CA          --     UC  AAU  UG  A
  CAUCGAACAUUUUGGUCCCU  AACUU  UAAAAAU  GUGUUUUUAG  CCUCA  GA   GG  UU C
  ||||||||||||||||||||  |||||  |||||||  ||||||||||  |||||  ||   ||  ||
  GUAGCUUGUAAAACCAGGGA  UUGAA  AUUUUUA  CACAAGAAUC  GGAGU  CU   CU  AA A
UG                    AC     AA       CC          AU     -C  -GU  GU  C
Stem-loop sequence CAUCGAACAUUUUGGUCCCUAAACUUCUAAAAAUCAGUGUUUUUAGCCUCAUCGAAAUGGUGUUACACAAUGUCUGUCCUGAGGUACUAAGAACACCCAUUUUUAAAAAGUUCAAGGGACCAAAAUGUUCGAUGGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014770117.1
ncRNA:21   AUCCCUGGUUUUACAAGCUAC   1
  ***|*|||||||||||||||*
targets:641   CCUGUACCAAAAUGUUCGAUA   661

3.0 PREDICTED: Glycine max RING-H2 finger protein ATL22-like (LOC102660873), mRNA RING-H2 finger protein ATL22-like(LOC102660873) coding protein psRNATarget
XM_006601104.2
ncRNA:21   AUCCCUGGUUUUACAAGCUAC   1
  ***|*|||||||||||||||*
targets:605   CCUGUACCAAAAUGUUCGAUA   625

3.0 PREDICTED: Glycine max probable receptor-like protein kinase At1g67000 (LOC100811907), mRNA probable receptor-like protein kinase At1g67000(LOC100811907) coding protein psRNATarget
XM_003549252.3
ncRNA:21   AUCCCUGGUUUUACAAGCUAC   1
  ***|*|||||||||||||||*
targets:640   CCUGUACCAAAAUGUUCGAUA   660

3.0 PREDICTED: Glycine max probable receptor-like protein kinase At1g67000 (LOC100809236), mRNA probable receptor-like protein kinase At1g67000(LOC100809236) coding protein psRNATarget
XM_003549256.3
ncRNA:21   AUCCCUGGUUUUACAAGCUAC   1
  ***|*|||||||||||||||*
targets:643   CCUGUACCAAAAUGUUCGAUA   663

3.0 PREDICTED: Glycine max probable receptor-like protein kinase At1g67000 (LOC100813531), mRNA probable receptor-like protein kinase At1g67000(LOC100813531) coding protein psRNATarget