ncRNA ID | novel_gma_miR7524 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr19:45981432-45981567 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451611 |
Length | 21 |
Mature sequence(if miRNA) | 116 - CAUCGAACAUUUUGGUCCCUA - 136 |
Stem-loop(if miRNA) |
--                    -A     -C       CA          --     UC  AAU  UG  A   CAUCGAACAUUUUGGUCCCU  AACUU  UAAAAAU  GUGUUUUUAG  CCUCA  GA   GG  UU C   ||||||||||||||||||||  |||||  |||||||  ||||||||||  |||||  ||   ||  ||   GUAGCUUGUAAAACCAGGGA  UUGAA  AUUUUUA  CACAAGAAUC  GGAGU  CU   CU  AA A UG                    AC     AA       CC          AU     -C  -GU  GU  C |
Stem-loop sequence | CAUCGAACAUUUUGGUCCCUAAACUUCUAAAAAUCAGUGUUUUUAGCCUCAUCGAAAUGGUGUUACACAAUGUCUGUCCUGAGGUACUAAGAACACCCAUUUUUAAAAAGUUCAAGGGACCAAAAUGUUCGAUGGU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_014770117.1 |
|
3.0 | PREDICTED: Glycine max RING-H2 finger protein ATL22-like (LOC102660873), mRNA | RING-H2 finger protein ATL22-like(LOC102660873) | coding protein | psRNATarget | |||||||||
XM_006601104.2 |
|
3.0 | PREDICTED: Glycine max probable receptor-like protein kinase At1g67000 (LOC100811907), mRNA | probable receptor-like protein kinase At1g67000(LOC100811907) | coding protein | psRNATarget | |||||||||
XM_003549252.3 |
|
3.0 | PREDICTED: Glycine max probable receptor-like protein kinase At1g67000 (LOC100809236), mRNA | probable receptor-like protein kinase At1g67000(LOC100809236) | coding protein | psRNATarget | |||||||||
XM_003549256.3 |
|
3.0 | PREDICTED: Glycine max probable receptor-like protein kinase At1g67000 (LOC100813531), mRNA | probable receptor-like protein kinase At1g67000(LOC100813531) | coding protein | psRNATarget |