Search result

BaseInfo

ncRNA ID	novel_gma_miR7520
Species	Glycine max
Class	miRNA
Genome position	Chr18:13405610-13405667 [+]
Reference genome	Glycine_max_v2.0
Source	SRR1451611
Length	24
Mature sequence(if miRNA)	35 - AACUUACGGAUCAAGUUGAUUCGU - 58
Stem-loop(if miRNA)	--       G               C  A   GGAUCAA UUGAUCCGUAAGUUU UU A   ||||||| ||||||||||||||| ||   CUUAGUU AACUAGGCAUUCAAA AA A UG       G               A  A
Stem-loop sequence	GGAUCAAGUUGAUCCGUAAGUUUCUUAAAAAAAAAACUUACGGAUCAAGUUGAUUCGU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_003547498.3	ncRNA:24   UGCUUAGUUGAACUAGGCAUUCAA   1   |=|=|||||||||||||||||||* targets:458   AUGGAUCAACUUGAUCCGUAAGUC   481 Target Full Sequence	1.0	PREDICTED: Glycine max CBL-interacting serine/threonine-protein kinase 1-like (LOC100780524), transcript variant X1, mRNA	CBL-interacting serine/threonine-protein kinase 1-like(LOC100780524)	coding protein	psRNATarget
XM_014768353.1	ncRNA:24   UGCUUAGUUGAACUAGGCAUUCAA   1   |=|=|||||||||||||||||||* targets:1053   AUGGAUCAACUUGAUCCGUAAGUC   1076 Target Full Sequence	1.0	PREDICTED: Glycine max CBL-interacting serine/threonine-protein kinase 1-like (LOC100780524), transcript variant X2, mRNA	CBL-interacting serine/threonine-protein kinase 1-like(LOC100780524)	coding protein	psRNATarget
XM_006600975.2	ncRNA:24   UGCUUAGUUGAACUAGGCAUUC-AA   1   |||=||||||||||||||||||-|| targets:1253   ACGGAUCAACUUGAUCCGUAAGCUU   1277 Target Full Sequence	3.0	PREDICTED: Glycine max basic leucine zipper 9-like (LOC100776831), mRNA	basic leucine zipper 9-like(LOC100776831)	coding protein	psRNATarget