Search result

BaseInfo

ncRNA ID novel_gma_miR7518
Species Glycine max
Class miRNA
Genome position Chr18:45534092-45534195 [-]
Reference genome Glycine_max_v2.0
Source SRR1451611
Length 21
Mature sequence(if miRNA) 1 - UAGAGGACUAAUUUAAGAAUU - 21
Stem-loop(if miRNA) --UUGG      U    G         A     UA             AUAU   A
      UGAAUU AGUU UUUAACUUU UAAAA  GUAUAUGAAUUUA    GUU A
      |||||| |||| ||||||||| |||||  |||||||||||||    |||
      AUUUAA UCAG AGAUUGAAA AUUUU  UAUAUACUUAAAU    CAG G
UUAAGA      -    G         -     --             ----   A
Stem-loop sequence UUGGUGAAUUUAGUUGUUUAACUUUAUAAAAUAGUAUAUGAAUUUAAUAUGUUAAGAGACUAAAUUCAUAUAUUUUUAAAAGUUAGAGGACUAAUUUAAGAAUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006599003.2
ncRNA:21   UUAAGAAUUUAAUCAGGAGAU   1
  =*|||||||||||*|||||||
targets:1524   GCUUCUUAAAUUAAUCCUCUA   1544

1.5 PREDICTED: Glycine max vacuolar-processing enzyme-like (LOC100788554), mRNA vacuolar-processing enzyme-like(LOC100788554) coding protein psRNATarget