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BaseInfo

ncRNA ID novel_gma_miR7513
Species Glycine max
Class miRNA
Genome position Chr11:9459074-9459209 [-]
Reference genome Glycine_max_v2.0
Source SRR1451611
Length 20
Mature sequence(if miRNA) 117 - UUAGCUAUGAGUCUUGAAAC - 136
Stem-loop(if miRNA) --   G  -   AG   UG  ACUA       G   AAUG GAAAGAAGGAAUAUACAAGACAUCAAUGA
  UUA CU AUG  UCU  AA    AAAUCAA UUG    U                             G
  ||| || |||  |||  ||    ||||||| |||    |
  GAU GA UAC  AGA  UU    UUUGGUU AAC    U                             G
UU   G  C   CU   GU  -AAG       A   --CG CCGUGAUAUGUAAAAUUACUAGUUGAAAU
Stem-loop sequence UUAGCUAUGAGUCUUGAAACUAAAAUCAAGUUGAAUGUGAAAGAAGGAAUAUACAAGACAUCAAUGAGGUAAAGUUGAUCAUUAAAAUGUAUAGUGCCUGCCAAAUUGGUUUGAAUUUGAGAUCCAUCAGGUAGUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014765728.1
ncRNA:20   CAAAGUUCUGAGUAUCGAUU   1
  ||||||||||||||||||*=
targets:343   GUUUCAAGACUCAUAGCUUG   362

2.5 PREDICTED: Glycine max nuclear transcription factor Y subunit C-3-like (LOC100807046), mRNA nuclear transcription factor Y subunit C-3-like(LOC100807046) coding protein psRNATarget