ncRNA ID | novel_gma_miR7508 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr15:49129627-49129748 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451611 |
Length | 24 |
Mature sequence(if miRNA) | 99 - AUGGACUAAAUAAAUAAAUAGACU - 122 |
Stem-loop(if miRNA) |
--A             -     CUACCUA    UAUGCCUCUCACAUGAGACAUUAAUUCUAAC    UUAUUUAUUUAUU AGUCC       GUCA                               A    ||||||||||||| |||||       ||||                               U    GAUAAAUAAAUAA UCAGG       AUUA                               U UCA             A     ------U    CAAAUAAUUACAGUGUACUCGGUUCACCCUC |
Stem-loop sequence | AUUAUUUAUUUAUUAGUCCCUACCUAGUCAUAUGCCUCUCACAUGAGACAUUAAUUCUAACAUUCUCCCACUUGGCUCAUGUGACAUUAAUAAACAUUAUGGACUAAAUAAAUAAAUAGACU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_006604530.2 |
|
2.5 | PREDICTED: Glycine max protein SHOOT GRAVITROPISM 6 (LOC100800961), transcript variant X6, mRNA | protein SHOOT GRAVITROPISM 6(LOC100800961) | coding protein | psRNATarget |