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BaseInfo

ncRNA ID novel_gma_miR7508
Species Glycine max
Class miRNA
Genome position Chr15:49129627-49129748 [+]
Reference genome Glycine_max_v2.0
Source SRR1451611
Length 24
Mature sequence(if miRNA) 99 - AUGGACUAAAUAAAUAAAUAGACU - 122
Stem-loop(if miRNA) --A             -     CUACCUA    UAUGCCUCUCACAUGAGACAUUAAUUCUAAC
   UUAUUUAUUUAUU AGUCC       GUCA                               A
   ||||||||||||| |||||       ||||                               U
   GAUAAAUAAAUAA UCAGG       AUUA                               U
UCA             A     ------U    CAAAUAAUUACAGUGUACUCGGUUCACCCUC
Stem-loop sequence AUUAUUUAUUUAUUAGUCCCUACCUAGUCAUAUGCCUCUCACAUGAGACAUUAAUUCUAACAUUCUCCCACUUGGCUCAUGUGACAUUAAUAAACAUUAUGGACUAAAUAAAUAAAUAGACU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006604530.2
ncRNA:22   AGAUAAAUAAAUAAAUCAGGUA   1
  |=||||||||||||||||*||*
targets:1   UUUAUUUAUUUAUUUAGUGCAA   22

2.5 PREDICTED: Glycine max protein SHOOT GRAVITROPISM 6 (LOC100800961), transcript variant X6, mRNA protein SHOOT GRAVITROPISM 6(LOC100800961) coding protein psRNATarget