Search result

BaseInfo

ncRNA ID	novel_gma_miR7498
Species	Glycine max
Class	miRNA
Genome position	Chr13:2549334-2549448 [-]
Reference genome	Glycine_max_v2.0
Source	SRR1451611
Length	24
Mature sequence(if miRNA)	92 - UAUUUGACAAACUUCUCUAGGCCU - 115
Stem-loop(if miRNA)	UAUUUGACAAACU   CU      --GACAU    U  G    -U  UA        AG  AU              UCU  AGGCCU       UGCA AU UAGU  GG  GAUUAGGA  GU  A              |||  ||||||       |||| || ||||  ||  ||||||||  ||              AGA  UUUGGG       ACGU UA GUUA  CC  UUAGUUCU  UA  C ---------UUAU   UU      AAAGAUU    -  G    CU  UA        AA  AU
Stem-loop sequence	UAUUUGACAAACUUCUCUAGGCCUGACAUUGCAUAUGUAGUUGGUAGAUUAGGAAGGUAUACUAAUAAUCUUGAUUAUCCUCAUUGGAUUGCAUUAGAAAGGGUUUUUAGAUAUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_003540242.3	ncRNA:24   UCCGGAUCUCUUCAAACAGUUUAU   1   |*|==|||||=||||||||||||* targets:1399   AAGUUUAGAGGAGUUUGUCAAAUC   1422 Target Full Sequence	2.0	PREDICTED: Glycine max cellulose synthase-like protein H1 (LOC100788824), mRNA	cellulose synthase-like protein H1(LOC100788824)	coding protein	psRNATarget
XM_014779216.1	ncRNA:24   UCCGGAUCUCUUCAAACAGUUUAU   1   **||=*|||||||||||||||||= targets:2480   UUGCUAAGAGAAGUUUGUCAAAUG   2503 Target Full Sequence	2.0	PREDICTED: Glycine max Fanconi anemia group M protein (LOC100820078), transcript variant X3, mRNA	Fanconi anemia group M protein(LOC100820078)	coding protein	psRNATarget
XM_014779214.1	ncRNA:24   UCCGGAUCUCUUCAAACAGUUUAU   1   **||=*|||||||||||||||||= targets:2523   UUGCUAAGAGAAGUUUGUCAAAUG   2546 Target Full Sequence	2.0	PREDICTED: Glycine max Fanconi anemia group M protein (LOC100820078), transcript variant X2, mRNA	Fanconi anemia group M protein(LOC100820078)	coding protein	psRNATarget
XM_014779213.1	ncRNA:24   UCCGGAUCUCUUCAAACAGUUUAU   1   **||=*|||||||||||||||||= targets:2523   UUGCUAAGAGAAGUUUGUCAAAUG   2546 Target Full Sequence	2.0	PREDICTED: Glycine max Fanconi anemia group M protein (LOC100820078), transcript variant X1, mRNA	Fanconi anemia group M protein(LOC100820078)	coding protein	psRNATarget
XM_006585680.2	ncRNA:24   UCCGGAUCUCUUCAAACAGUUUAU   1   **||=*|||||||||||||||||= targets:2523   UUGCUAAGAGAAGUUUGUCAAAUG   2546 Target Full Sequence	2.0	PREDICTED: Glycine max Fanconi anemia group M protein (LOC100820078), transcript variant X4, mRNA	Fanconi anemia group M protein(LOC100820078)	coding protein	psRNATarget