ncRNA ID | novel_gma_miR7495 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr1:3010364-3010462 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451611 |
Length | 24 |
Mature sequence(if miRNA) | 76 - AAAUCAUGAUUUCGUUGUGCGUCU - 99 |
Stem-loop(if miRNA) |
--AAAUC              CG C        --    C          C        AUGAUUUCGUUGUG  U UGGAAUUU  GAUA ACAAUAGAAU A        ||||||||||||||  | ||||||||  |||| ||||||||||        UACUAAAGUAACAC  A ACCUUAAA  CUGU UGUUGUUUUA A GUCUUAA              AU A        AU    -          G |
Stem-loop sequence | AAAUCAUGAUUUCGUUGUGCGUCUGGAAUUUGAUACACAAUAGAAUCAAGAUUUUGUUGUUGUCUAAAAUUCCAAAUACACAAUGAAAUCAUAAUUCUG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
BT094159.1 |
|
2.5 | Soybean clone JCVI-FLGm-18C12 unknown mRNA | NA | coding protein | psRNATarget | |||||||||
EU661925.1 |
|
2.5 | Glycine max NAC domain protein (NAC28) mRNA, partial cds | NA | coding protein | psRNATarget | |||||||||
XM_003549636.3 |
|
2.5 | PREDICTED: Glycine max NAC domain-containing protein 100 (LOC100170719), mRNA | NAC domain-containing protein 100(LOC100170719) | coding protein | psRNATarget |