Search result

BaseInfo

ncRNA ID	novel_gma_miR7492
Species	Glycine max
Class	miRNA
Genome position	Chr12:14913490-14913535 [+]
Reference genome	Glycine_max_v2.0
Source	SRR1451611
Length	21
Mature sequence(if miRNA)	1 - UUUUAUUUUGCAAGGACAAUU - 21
Stem-loop(if miRNA)	--UUUUA      A       UU        UUUUGC AGGACAA  G        |||||| |||||||        AAGACG UUCUGUU  G UUGGGGA      C       UU
Stem-loop sequence	UUUUAUUUUGCAAGGACAAUUGGUUUUGUCUUCGCAGAAAGGGGUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_006584656.2	ncRNA:21   UUAACAGGAACGUUUUAUUUU   1   |||||||*|||||||||||*| targets:375   AAUUGUCAUUGCAAAAUAACA   395 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC100811734 (LOC100811734), transcript variant X2, mRNA	uncharacterized LOC100811734(LOC100811734)	coding protein	psRNATarget
XM_014775826.1	ncRNA:21   UUAACAGGAACGUUUUAUUUU   1   |||||||*|||||||||||*| targets:322   AAUUGUCAUUGCAAAAUAACA   342 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC100778683 (LOC100778683), transcript variant X2, mRNA	uncharacterized LOC100778683(LOC100778683)	coding protein	psRNATarget
BT094585.1	ncRNA:21   UUAACAGGAACGUUUUAUUUU   1   =*|||||=||||||||*|||| targets:1090   GUUUGUCUUUGCAAAAAAAAA   1110 Target Full Sequence	2.5	Soybean clone JCVI-FLGm-18J8 unknown mRNA	NA	coding protein	psRNATarget
XM_014764456.1	ncRNA:21   UUAACAGGAACGUUUUAUUUU   1   *|||*|||||||||||*|||| targets:1578   CAUUUUCCUUGCAAAAAAAAA   1598 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC100807371 (LOC100807371), transcript variant X6, mRNA	uncharacterized LOC100807371(LOC100807371)	coding protein	psRNATarget
XM_014764454.1	ncRNA:21   UUAACAGGAACGUUUUAUUUU   1   *|||*|||||||||||*|||| targets:1704   CAUUUUCCUUGCAAAAAAAAA   1724 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC100807371 (LOC100807371), transcript variant X2, mRNA	uncharacterized LOC100807371(LOC100807371)	coding protein	psRNATarget
XM_003540733.3	ncRNA:21   UUAACAGGAACGUUUUAUUUU   1   *|||*|||||||||||*|||| targets:1827   CAUUUUCCUUGCAAAAAAAAA   1847 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC100807371 (LOC100807371), transcript variant X4, mRNA	uncharacterized LOC100807371(LOC100807371)	coding protein	psRNATarget
XM_014764453.1	ncRNA:21   UUAACAGGAACGUUUUAUUUU   1   *|||*|||||||||||*|||| targets:1836   CAUUUUCCUUGCAAAAAAAAA   1856 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC100807371 (LOC100807371), transcript variant X1, mRNA	uncharacterized LOC100807371(LOC100807371)	coding protein	psRNATarget
XM_003540734.3	ncRNA:21   UUAACAGGAACGUUUUAUUUU   1   *|||*|||||||||||*|||| targets:1877   CAUUUUCCUUGCAAAAAAAAA   1897 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC100807371 (LOC100807371), transcript variant X5, mRNA	uncharacterized LOC100807371(LOC100807371)	coding protein	psRNATarget
XM_014764455.1	ncRNA:21   UUAACAGGAACGUUUUAUUUU   1   *|||*|||||||||||*|||| targets:1886   CAUUUUCCUUGCAAAAAAAAA   1906 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC100807371 (LOC100807371), transcript variant X3, mRNA	uncharacterized LOC100807371(LOC100807371)	coding protein	psRNATarget
AK287201.1	ncRNA:21   UUAACAGGAACGUUUUAUUUU   1   ==|||*||||||||||*|||| targets:3276   GGUUGGCCUUGCAAAAAAAAA   3296 Target Full Sequence	2.5	Glycine max cDNA, clone: GMFL01-46-G17	NA	coding protein	psRNATarget