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BaseInfo

ncRNA ID novel_gma_miR7491
Species Glycine max
Class miRNA
Genome position Chr1:7584167-7584247 [-]
Reference genome Glycine_max_v2.0
Source SRR1451611
Length 24
Mature sequence(if miRNA) 58 - AAUUUCUCAUCUUCAGAUUGGUGA - 81
Stem-loop(if miRNA) --       -     UC      G -------     UG U   A
  AAUUUCU CAUCU  AGAUUG U       GAAUA  A GAU U
  ||||||| |||||  |||||| |       |||||  | ||| A
  UUAAAGA GUAGA  UCUAAC A       UUUAU  U CUA G
AG       A     --      G GACAAGA     GU U   A
Stem-loop sequence AAUUUCUCAUCUUCAGAUUGGUGAAUAUGAUGAUAUAGAAUCUUUGUAUUUAGAACAGAGCAAUCUAGAUGAAGAAAUUGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006576245.2
ncRNA:24   AGUGGUUAGACUUCUACUCUUUAA   1
  *|==*|||||*|*|||||||||||
targets:613   ACGUAAAUCUUAUGAUGAGAAAUU   636

2.5 PREDICTED: Glycine max SKP1-like protein 21 (LOC100785953), transcript variant X3, mRNA SKP1-like protein 21(LOC100785953) coding protein psRNATarget
XM_014773408.1
ncRNA:24   AGUGGUUAGACUUCUACUCUUUAA   1
  *|==*|||||*|*|||||||||||
targets:686   ACGUAAAUCUUAUGAUGAGAAAUU   709

2.5 PREDICTED: Glycine max SKP1-like protein 21 (LOC100785953), transcript variant X4, mRNA SKP1-like protein 21(LOC100785953) coding protein psRNATarget
XM_014773406.1
ncRNA:24   AGUGGUUAGACUUCUACUCUUUAA   1
  *|==*|||||*|*|||||||||||
targets:688   ACGUAAAUCUUAUGAUGAGAAAUU   711

2.5 PREDICTED: Glycine max SKP1-like protein 21 (LOC100785953), transcript variant X1, mRNA SKP1-like protein 21(LOC100785953) coding protein psRNATarget
XM_014773412.1
ncRNA:24   AGUGGUUAGACUUCUACUCUUUAA   1
  *|==*|||||*|*|||||||||||
targets:2092   ACGUAAAUCUUAUGAUGAGAAAUU   2115

2.5 PREDICTED: Glycine max SKP1-like protein 21 (LOC100785953), transcript variant X8, mRNA SKP1-like protein 21(LOC100785953) coding protein psRNATarget
XM_014773410.1
ncRNA:24   AGUGGUUAGACUUCUACUCUUUAA   1
  *|==*|||||*|*|||||||||||
targets:2092   ACGUAAAUCUUAUGAUGAGAAAUU   2115

2.5 PREDICTED: Glycine max SKP1-like protein 21 (LOC100785953), transcript variant X6, mRNA SKP1-like protein 21(LOC100785953) coding protein psRNATarget
XM_014773407.1
ncRNA:24   AGUGGUUAGACUUCUACUCUUUAA   1
  *|==*|||||*|*|||||||||||
targets:2013   ACGUAAAUCUUAUGAUGAGAAAUU   2036

2.5 PREDICTED: Glycine max SKP1-like protein 21 (LOC100785953), transcript variant X2, mRNA SKP1-like protein 21(LOC100785953) coding protein psRNATarget
XM_014773411.1
ncRNA:24   AGUGGUUAGACUUCUACUCUUUAA   1
  *|==*|||||*|*|||||||||||
targets:2092   ACGUAAAUCUUAUGAUGAGAAAUU   2115

2.5 PREDICTED: Glycine max SKP1-like protein 21 (LOC100785953), transcript variant X7, mRNA SKP1-like protein 21(LOC100785953) coding protein psRNATarget
XM_014773409.1
ncRNA:24   AGUGGUUAGACUUCUACUCUUUAA   1
  *|==*|||||*|*|||||||||||
targets:2092   ACGUAAAUCUUAUGAUGAGAAAUU   2115

2.5 PREDICTED: Glycine max SKP1-like protein 21 (LOC100785953), transcript variant X5, mRNA SKP1-like protein 21(LOC100785953) coding protein psRNATarget