ncRNA ID | novel_gma_miR7478 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr9:24723543-24723656 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451611 |
Length | 19 |
Mature sequence(if miRNA) | 96 - UCCAGGAUUGUUUUCUACU - 114 |
Stem-loop(if miRNA) |
--                   A   -      -U  ------      -----AU           UAGAAAACAAUCUUGGAUU CCA GGAAAC  UC      AUAGGC       AGUAUAUGU   ||||||||||||||||||| ||| ||||||  ||      ||||||       ||||||||A   AUCUUUUGUUAGGACCUAA GGU CCUUUG  AG      UAUUUG       UCAUAUACA UC                   C   A      UU  AACCUA      AAAUACU         |
Stem-loop sequence | UAGAAAACAAUCUUGGAUUACCAGGAAACUUCAUAGGCAUAGUAUAUGUAACAUAUACUUCAUAAAGUUUAUAUCCAAGAUUGUUUCCAUGGCAAUCCAGGAUUGUUUUCUACU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_006573441.2 |
|
2.0 | PREDICTED: Glycine max kinesin-like calmodulin-binding protein homolog (LOC100782701), transcript variant X2, mRNA | kinesin-like calmodulin-binding protein homolog(LOC100782701) | coding protein | psRNATarget | |||||||||
XM_006573440.2 |
|
2.0 | PREDICTED: Glycine max kinesin-like calmodulin-binding protein homolog (LOC100782701), transcript variant X1, mRNA | kinesin-like calmodulin-binding protein homolog(LOC100782701) | coding protein | psRNATarget |