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BaseInfo

ncRNA ID novel_gma_miR7478
Species Glycine max
Class miRNA
Genome position Chr9:24723543-24723656 [+]
Reference genome Glycine_max_v2.0
Source SRR1451611
Length 19
Mature sequence(if miRNA) 96 - UCCAGGAUUGUUUUCUACU - 114
Stem-loop(if miRNA) --                   A   -      -U  ------      -----AU        
  UAGAAAACAAUCUUGGAUU CCA GGAAAC  UC      AUAGGC       AGUAUAUGU
  ||||||||||||||||||| ||| ||||||  ||      ||||||       ||||||||A
  AUCUUUUGUUAGGACCUAA GGU CCUUUG  AG      UAUUUG       UCAUAUACA
UC                   C   A      UU  AACCUA      AAAUACU        
Stem-loop sequence UAGAAAACAAUCUUGGAUUACCAGGAAACUUCAUAGGCAUAGUAUAUGUAACAUAUACUUCAUAAAGUUUAUAUCCAAGAUUGUUUCCAUGGCAAUCCAGGAUUGUUUUCUACU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006573441.2
ncRNA:19   UCAUCUUUUGUUAGGACCU   1
  |||*||||||||||||||=
targets:3386   AGUUGAAAACAAUCCUGGG   3404

2.0 PREDICTED: Glycine max kinesin-like calmodulin-binding protein homolog (LOC100782701), transcript variant X2, mRNA kinesin-like calmodulin-binding protein homolog(LOC100782701) coding protein psRNATarget
XM_006573440.2
ncRNA:19   UCAUCUUUUGUUAGGACCU   1
  |||*||||||||||||||=
targets:3390   AGUUGAAAACAAUCCUGGG   3408

2.0 PREDICTED: Glycine max kinesin-like calmodulin-binding protein homolog (LOC100782701), transcript variant X1, mRNA kinesin-like calmodulin-binding protein homolog(LOC100782701) coding protein psRNATarget