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BaseInfo

ncRNA ID	novel_gma_miR7476
Species	Glycine max
Class	miRNA
Genome position	Chr9:35293435-35293582 [-]
Reference genome	Glycine_max_v2.0
Source	SRR1451611
Length	24
Mature sequence(if miRNA)	1 - GUUGUGUUGUGAUGUGAUGUUGGA - 24
Stem-loop(if miRNA)	----GUAC         U   UG  UGA      -GU        --------UG  U     UUGUG   UG -     A         CACAUUACA AUA  AU   GUCUUA   GUUUAUGU          CA AAUGC     UAU  A UCGAU U         ||||||||| |||  ||   ||||||   ||||||||          || |||||     |||  | |||||         GUGUAGUGU UGU  UG   CAGAGU   UAAGUACA          GU UUGUG     AUG  U AGUUA U AGGUUGUA         -   GU  -UG      AAG        UGAGUUCCUA  U     UUAUA   GU C     G
Stem-loop sequence	GUACCACAUUACAUAUAUGAUUGAGUCUUAGUGUUUAUGUUGCAUAAUGCUUGUGUAUUGAUCGAUAUUGAUUGACUUGGUAAUAUUGUGUUUUGAUCCUUGAGUACAUGAAUGAAUGAGACGUGUUGUGUUGUGAUGUGAUGUUGGA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_003521171.3	ncRNA:24   AGGU--UGUAGUGUAGUGUUGUGUUG   1   ||||--|||||||||||||||||||| targets:143   UCCAUCACAUCACAUCACAACACAAC   168 Target Full Sequence	0.0	PREDICTED: Glycine max uncharacterized LOC100782225 (LOC100782225), transcript variant X2, mRNA	uncharacterized LOC100782225(LOC100782225)	coding protein	psRNATarget
XM_006576801.2	ncRNA:24   AGGU--UGUAGUGUAGUGUUGUGUUG   1   ||||--|||||||||||||||||||| targets:143   UCCAUCACAUCACAUCACAACACAAC   168 Target Full Sequence	0.0	PREDICTED: Glycine max uncharacterized LOC100782225 (LOC100782225), transcript variant X3, mRNA	uncharacterized LOC100782225(LOC100782225)	coding protein	psRNATarget
XM_014779457.1	ncRNA:24   AGGU---UGUAGUGUAGUGUUGUGUUG   1   |=||---=|||||||*||||||||||| targets:399   UUCACUCGCAUCACAACACAACACAAC   425 Target Full Sequence	1.5	PREDICTED: Glycine max IRK-interacting protein-like (LOC100789256), mRNA	IRK-interacting protein-like(LOC100789256)	coding protein	psRNATarget
BT098882.1	ncRNA:22   GUUGUAGUGUAGUGUUGUGUUG   1   *=||||||||*||||||||||| targets:1   GGACAUCACAACACAACACAAC   22 Target Full Sequence	1.5	Soybean clone JCVI-FLGm-13O7 unknown mRNA	NA	coding protein	psRNATarget
NM_001289238.1	ncRNA:20   UGUAGUGUAGUGUUGUGUUG   1   ||||||||*||||||||||| targets:1   ACAUCACAACACAACACAAC   20 Target Full Sequence	1.5	Glycine max brassinosteroid-regulated protein BRU1-like (LOC100784191), mRNA	brassinosteroid-regulated protein BRU1-like(LOC100784191)	coding protein	psRNATarget
XM_003548887.3	ncRNA:24   AGGUUGUAGUGUAGUGUUGUGUUG   1   ||||-|*||||||||||||||||* targets:59   UCCA-CCUCACAUCACAACACAAG   81 Target Full Sequence	2.0	PREDICTED: Glycine max glucan endo-1,3-beta-glucosidase 3-like (LOC100789267), transcript variant X1, mRNA	glucan endo-1,3-beta-glucosidase 3-like(LOC100789267)	coding protein	psRNATarget
XM_006599363.2	ncRNA:24   AGGUUGUAGUGUAGUGUUGUGUUG   1   ||||-|*||||||||||||||||* targets:59   UCCA-CCUCACAUCACAACACAAG   81 Target Full Sequence	2.0	PREDICTED: Glycine max glucan endo-1,3-beta-glucosidase 3-like (LOC100789267), transcript variant X3, mRNA	glucan endo-1,3-beta-glucosidase 3-like(LOC100789267)	coding protein	psRNATarget
XM_006599362.2	ncRNA:24   AGGUUGUAGUGUAGUGUUGUGUUG   1   ||||-|*||||||||||||||||* targets:59   UCCA-CCUCACAUCACAACACAAG   81 Target Full Sequence	2.0	PREDICTED: Glycine max glucan endo-1,3-beta-glucosidase 3-like (LOC100789267), transcript variant X2, mRNA	glucan endo-1,3-beta-glucosidase 3-like(LOC100789267)	coding protein	psRNATarget
XM_006599364.2	ncRNA:24   AGGUUGUAGUGUAGUGUUGUGUUG   1   ||||-|*||||||||||||||||* targets:59   UCCA-CCUCACAUCACAACACAAG   81 Target Full Sequence	2.0	PREDICTED: Glycine max glucan endo-1,3-beta-glucosidase 3-like (LOC100789267), transcript variant X4, mRNA	glucan endo-1,3-beta-glucosidase 3-like(LOC100789267)	coding protein	psRNATarget
XM_003518146.3	ncRNA:24   AGGUUGUAGUGUAGUGUUGUGUUG   1   *=|==|*||||||||||||||||* targets:64   CUCGGCCUCACAUCACAACACAAG   87 Target Full Sequence	2.0	PREDICTED: Glycine max glucan endo-1,3-beta-glucosidase 3-like (LOC100810169), mRNA	glucan endo-1,3-beta-glucosidase 3-like(LOC100810169)	coding protein	psRNATarget
XM_003516993.3	ncRNA:24   AGGU-UGUAGUGUAGUGUUGUGUUG   1   |=||-||*|||||*||||||||||| targets:83   UUCAUACUUCACAACACAACACAAC   107 Target Full Sequence	2.5	PREDICTED: Glycine max cinnamoyl-CoA reductase 2-like (LOC100790333), mRNA	cinnamoyl-CoA reductase 2-like(LOC100790333)	coding protein	psRNATarget
XM_014768087.1	ncRNA:24   AGGU---UGUAGUGUAGUGUUGUGUUG   1   |=||---|||*||||*||||||||||| targets:62   UUCACACACAACACAACACAACACAAC   88 Target Full Sequence	2.5	PREDICTED: Glycine max lateral signaling target protein 2 homolog (LOC100779988), transcript variant X1, mRNA	lateral signaling target protein 2 homolog(LOC100779988)	coding protein	psRNATarget
XM_003545913.3	ncRNA:24   AGGU---UGUAGUGUAGUGUUGUGUUG   1   |=||---|||*||||*||||||||||| targets:64   UUCACACACAACACAACACAACACAAC   90 Target Full Sequence	2.5	PREDICTED: Glycine max lateral signaling target protein 2 homolog (LOC100779988), transcript variant X2, mRNA	lateral signaling target protein 2 homolog(LOC100779988)	coding protein	psRNATarget