ncRNA ID | novel_gma_miR7475 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr8:17636383-17636498 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451611 |
Length | 21 |
Mature sequence(if miRNA) | 96 - UGAUGAAGAAUUGCUGGGGAU - 116 |
Stem-loop(if miRNA) |
-C          A   A     U    C      ---------AA       AUAUC  AUAUGGC   UUCCGGCAAU UCU UAUCA CAUG AUGCAC           AUAUCUC     CC       U   |||||||||| ||| ||||| |||| ||||||           |||||||     ||   GGGGUCGUUA AGA GUAGU GUAC UACGUG           UAUGGAG     CU       G UA          -   A     -    -      GAAUCUUUUUG       -----  AGUCUUA |
Stem-loop sequence | CUUCCGGCAAUAUCUAUAUCAUCAUGCAUGCACAAAUAUCUCAUAUCCCAUAUGGCUGAUUCUGAUCGAGGUAUGUUUUUCUAAGGUGCAUCAUGUGAUGAAGAAUUGCUGGGGAU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003531684.3 |
|
0.0 | PREDICTED: Glycine max aquaporin NIP6-1-like (LOC100798410), mRNA | aquaporin NIP6-1-like(LOC100798410) | coding protein | psRNATarget | |||||||||
XM_003519228.3 |
|
2.5 | PREDICTED: Glycine max protein NUCLEAR FUSION DEFECTIVE 4-like (LOC100808034), mRNA | protein NUCLEAR FUSION DEFECTIVE 4-like(LOC100808034) | coding protein | psRNATarget |