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BaseInfo

ncRNA ID novel_gma_miR7475
Species Glycine max
Class miRNA
Genome position Chr8:17636383-17636498 [+]
Reference genome Glycine_max_v2.0
Source SRR1451611
Length 21
Mature sequence(if miRNA) 96 - UGAUGAAGAAUUGCUGGGGAU - 116
Stem-loop(if miRNA) -C          A   A     U    C      ---------AA       AUAUC  AUAUGGC
  UUCCGGCAAU UCU UAUCA CAUG AUGCAC           AUAUCUC     CC       U
  |||||||||| ||| ||||| |||| ||||||           |||||||     ||
  GGGGUCGUUA AGA GUAGU GUAC UACGUG           UAUGGAG     CU       G
UA          -   A     -    -      GAAUCUUUUUG       -----  AGUCUUA
Stem-loop sequence CUUCCGGCAAUAUCUAUAUCAUCAUGCAUGCACAAAUAUCUCAUAUCCCAUAUGGCUGAUUCUGAUCGAGGUAUGUUUUUCUAAGGUGCAUCAUGUGAUGAAGAAUUGCUGGGGAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003531684.3
ncRNA:21   UAGGGGUCGUUAAGAAGUAGU   1
  |||||||||||||||||||||
targets:1492   AUCCCCAGCAAUUCUUCAUCA   1512

0.0 PREDICTED: Glycine max aquaporin NIP6-1-like (LOC100798410), mRNA aquaporin NIP6-1-like(LOC100798410) coding protein psRNATarget
XM_003519228.3
ncRNA:21   UAGGGGUCGUUAAGAAGUAGU   1
  *||*|||||||||||||*|||
targets:95   CUCACCAGCAAUUCUUCUUCA   115

2.5 PREDICTED: Glycine max protein NUCLEAR FUSION DEFECTIVE 4-like (LOC100808034), mRNA protein NUCLEAR FUSION DEFECTIVE 4-like(LOC100808034) coding protein psRNATarget