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BaseInfo

ncRNA ID novel_gma_miR7471
Species Glycine max
Class miRNA
Genome position Chr7:11768433-11768507 [-]
Reference genome Glycine_max_v2.0
Source SRR1451611
Length 24
Mature sequence(if miRNA) 52 - AGAAGCUUACGGAUCAAGUUGAUC - 75
Stem-loop(if miRNA) --A    C   C                    G G  U
   GAAG UUA GGAUCAAGUUGAUCCGUAAA U UG A
   |||| ||| |||||||||||||||||||| | ||
   CUUC AAU CCUAGUUCAACUAGGCGUUU A AC A
UAC    -   A                    G A  A
Stem-loop sequence AGAAGCUUACGGAUCAAGUUGAUCCGUAAAGUGUGUAAACAAAGUUUGCGGAUCAACUUGAUCCAUAACUUCCAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006600975.2
ncRNA:24   CUAGUUGAACUAGGCAUUCGAAGA   1
  ||||||||||||||||||||||*|
targets:1256   GAUCAACUUGAUCCGUAAGCUUAU   1279

1.5 PREDICTED: Glycine max basic leucine zipper 9-like (LOC100776831), mRNA basic leucine zipper 9-like(LOC100776831) coding protein psRNATarget
XM_014762492.1
ncRNA:24   CUAGUUGAACUAGGCAUUCGAAGA   1
  **|=|=||*|*|||||||||||||
targets:695   UCUUAGCUGGCUCCGUAAGCUUCU   718

3.0 PREDICTED: Glycine max sugar transport protein 14-like (LOC100802488), mRNA sugar transport protein 14-like(LOC100802488) coding protein psRNATarget
XM_003533350.3
ncRNA:24   CUAGUUGAACUAGGCAUUCGAAGA   1
  **|=|=||*|*|||||||||||||
targets:695   UCUUAGCUGGUUCCGUAAGCUUCU   718

3.0 PREDICTED: Glycine max sugar transport protein 14-like (LOC100782523), mRNA sugar transport protein 14-like(LOC100782523) coding protein psRNATarget