ncRNA ID | novel_gma_miR7468 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr6:20287416-20287612 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451611 |
Length | 22 |
Mature sequence(if miRNA) | 176 - CUAAACUUUUGUUUGACUGGUC - 197 |
Stem-loop(if miRNA) |
--     C             -  C  A   A     U         ------AA       CC    -----           ---------------   -     UUUUU   CUAAA UUUUGUUUGACUG GU AA GUC UUAAA UUUUAAAAA        UUUAGUU  UAAA     UAAAAAUUUGA               AUC CAUUA     A   ||||| ||||||||||||| || || ||| ||||| |||||||||        |||||||  ||||     |||||||||||               ||| |||||   GAUUU AAAACAAACUGAU CA UU CAG GAUUU AAAAUUUUU        AGAUCAG  AUUU     AUUUUUAAACU               UAG GUAAU     U AA     A             A  -  A   G     C         ACAUUCAA       AU    AAAAA           AAAAAUCAAGAAUUU   A     UUACU |
Stem-loop sequence | CUAAACUUUUGUUUGACUGGUCAAAGUCAUUAAAUUUUUAAAAAAAUUUAGUUCCUAAAUAAAAAUUUGAAUCCAUUAUUUUUAUUCAUUUAAUGAGAUUUUAAGAACUAAAAAUCAAAUUUUUAAAAAAUUUAUAGACUAGAAACUUACAUUUUUAAAACUUUAGGGACAUUACAUAGUCAAACAAAAAUUUAGAA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_014773987.1 |
|
1.5 | PREDICTED: Glycine max uncharacterized LOC102660671 (LOC102660671), mRNA | uncharacterized LOC102660671(LOC102660671) | coding protein | psRNATarget | |||||||||
XM_014773987.1 |
|
1.5 | PREDICTED: Glycine max uncharacterized LOC102660671 (LOC102660671), mRNA | uncharacterized LOC102660671(LOC102660671) | coding protein | psRNATarget |