ncRNA ID | novel_gma_miR7461 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr4:44057243-44057315 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451611 |
Length | 22 |
Mature sequence(if miRNA) | 52 - CUUACGAAUCAACUUGAUCUGU - 73 |
Stem-loop(if miRNA) |
--       C     C       AU   CC    CA   GGAUCAA UUGAU CGUAAGC  CUU  GGAU  C   ||||||| ||||| |||||||  |||  ||||  C   UCUAGUU AACUA GCAUUCG  GAA  CCUA  U UG       C     A       AG   UA    AU |
Stem-loop sequence | GGAUCAACUUGAUCCGUAAGCAUCUUCCGGAUCACCUUAAUCCAUAAGGAGCUUACGAAUCAACUUGAUCUGU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_006593444.2 |
|
1.5 | PREDICTED: Glycine max calcium-transporting ATPase 8, plasma membrane-type-like (LOC100813841), transcript variant X11, mRNA | calcium-transporting ATPase 8, plasma membrane-type-like(LOC100813841) | coding protein | psRNATarget | |||||||||
XM_003524153.3 |
|
2.5 | PREDICTED: Glycine max uncharacterized LOC100805437 (LOC100805437), mRNA | uncharacterized LOC100805437(LOC100805437) | coding protein | psRNATarget |