Search result

BaseInfo

ncRNA ID novel_gma_miR7461
Species Glycine max
Class miRNA
Genome position Chr4:44057243-44057315 [+]
Reference genome Glycine_max_v2.0
Source SRR1451611
Length 22
Mature sequence(if miRNA) 52 - CUUACGAAUCAACUUGAUCUGU - 73
Stem-loop(if miRNA) --       C     C       AU   CC    CA
  GGAUCAA UUGAU CGUAAGC  CUU  GGAU  C
  ||||||| ||||| |||||||  |||  ||||  C
  UCUAGUU AACUA GCAUUCG  GAA  CCUA  U
UG       C     A       AG   UA    AU
Stem-loop sequence GGAUCAACUUGAUCCGUAAGCAUCUUCCGGAUCACCUUAAUCCAUAAGGAGCUUACGAAUCAACUUGAUCUGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006593444.2
ncRNA:22   UGUCUAGUUCAACUAAGCAUUC   1
  ||=|||||||||||||||||*|
targets:3678   ACGGAUCAAGUUGAUUCGUAUG   3699

1.5 PREDICTED: Glycine max calcium-transporting ATPase 8, plasma membrane-type-like (LOC100813841), transcript variant X11, mRNA calcium-transporting ATPase 8, plasma membrane-type-like(LOC100813841) coding protein psRNATarget
XM_003524153.3
ncRNA:22   UGUCUAGUUCAACUAAGCAUUC   1
  ||=||||||||||||*|||||*
targets:235   ACGGAUCAAGUUGAUCCGUAAA   256

2.5 PREDICTED: Glycine max uncharacterized LOC100805437 (LOC100805437), mRNA uncharacterized LOC100805437(LOC100805437) coding protein psRNATarget