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BaseInfo

ncRNA ID novel_gma_miR7460
Species Glycine max
Class miRNA
Genome position Chr4:39607472-39607562 [+]
Reference genome Glycine_max_v2.0
Source SRR1451611
Length 22
Mature sequence(if miRNA) 70 - UUGGCUUCACAAAUUCAAAUUC - 91
Stem-loop(if miRNA) --UA       A    -  UG  -CCAU          -       C
    UUGGAUU GUGG GU  AA     AGCUAAAAUU CACUAAU A
    ||||||| |||| ||  ||     |||||||||| |||||||
    AACUUAA CACU CG  UU     UCGGUUUUAA GUGAUUA U
CUUA       A    U  GU  AAACC          A       A
Stem-loop sequence UAUUGGAUUAGUGGGUUGAACCAUAGCUAAAAUUCACUAAUCAUAAUUAGUGAAAUUUUGGCUCCAAAUUUGGCUUCACAAAUUCAAAUUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003540012.3
ncRNA:22   CU-UAAACUUAAACAC-UUCGGUU   1
  ||-|||||||||||||-|||||||
targets:1206   GAUAUUUGAAUUUGUGGAAGCCAA   1229

3.0 PREDICTED: Glycine max putative serine/threonine-protein kinase (LOC100797257), transcript variant X2, mRNA putative serine/threonine-protein kinase(LOC100797257) coding protein psRNATarget
XM_006582069.2
ncRNA:22   CU-UAAACUUAAACAC-UUCGGUU   1
  ||-|||||||||||||-|||||||
targets:1181   GAUAUUUGAAUUUGUGGAAGCCAA   1204

3.0 PREDICTED: Glycine max putative serine/threonine-protein kinase (LOC100801735), transcript variant X2, mRNA putative serine/threonine-protein kinase(LOC100801735) coding protein psRNATarget
XM_006592479.2
ncRNA:22   CU-UAAACUUAAACAC-UUCGGUU   1
  ||-|||||||||||||-|||||||
targets:1271   GAUAUUUGAAUUUGUGGAAGCCAA   1294

3.0 PREDICTED: Glycine max putative serine/threonine-protein kinase (LOC100797257), transcript variant X1, mRNA putative serine/threonine-protein kinase(LOC100797257) coding protein psRNATarget
XM_006582068.2
ncRNA:22   CU-UAAACUUAAACAC-UUCGGUU   1
  ||-|||||||||||||-|||||||
targets:1253   GAUAUUUGAAUUUGUGGAAGCCAA   1276

3.0 PREDICTED: Glycine max putative serine/threonine-protein kinase (LOC100801735), transcript variant X1, mRNA putative serine/threonine-protein kinase(LOC100801735) coding protein psRNATarget